Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1042 ATGGGTGGTTGCTGTTGCTGTTCTTCCAAGGACACTGATTCTGCTCAAAATACCTACTATTACTACCCCAGAGTATCAGAGGAGCATGTTCCGTTATCATCCAATCATGGTGCTGCGTCTGTTTTTGCTGGAGGTCCCAATCCAACTCTACCTGTAGCCAGAGAAATTTGTGCTGACAAAACTAATGCATCAGCTGCTGGGGCAAATCATGAGGCCTCGGCTAAGTTGGAAGAGCTGAAGGAATCAGCAGGGCTCAAAGTTCAGACAGACCTAGAACTACGAAAACTGGTAGAACCTATCATTTTAGAGGAAGAGGAGGATGTGTGCCCAATTTGTTTAGAAGAGTATGATGCAGAGAATCCAAAACTCACTACAAAATGTGATCATTATTTCCACCTTGCATGCATTCTGGAATGGATGGAAAGAAGTGAAACTTGTCCTGTATGTGATCAGGATATGGTTTTGGACCCTCTCATTCACTGA 483 0.4389 MGGCCCCSSKDTDSAQNTYYYYPRVSEEHVPLSSNHGAASVFAGGPNPTLPVAREICADKTNASAAGANHEASAKLEELKESAGLKVQTDLELRKLVEPIILEEEEDVCPICLEEYDAENPKLTTKCDHYFHLACILEWMERSETCPVCDQDMVLDPLIH* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1042 160 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 1 44 - -
Ahy15g1042 160 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 87 155 IPR013083 -
Ahy15g1042 160 ProSiteProfiles Zinc finger RING-type profile. 109 150 IPR001841 -
Ahy15g1042 160 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 49 159 - -
Ahy15g1042 160 SMART ring_2 109 149 IPR001841 -
Ahy15g1042 160 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN 1 44 - -
Ahy15g1042 160 Pfam Ring finger domain 108 149 IPR001841 -
Ahy15g1042 160 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN 49 159 - -
Ahy15g1042 160 SUPERFAMILY RING/U-box 102 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1042 Ahy-Chr15 16050458 16052414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g1042 1 156 C3H Transcription Factor Family AT5G41350 40.670 1.52e-41 136