Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1018 ATGATGTTGGAGGTTGAGACGGAGCTCGAGGAGTTGAGTTTTGAATTTGATTCATCTGAAGGAGATGGAGTCCATTTATGCCTTTCTTCTTCAAATTGCAACTGTGATGCCACTCTTCTGAAATCCACCCCTGTTTCAGGGAGTAGCAAGGCTGAAGCTAGACGCTGGTCAGAGGAAGAGGACAACCTTTTGATTCAGATAGTCAAGAAGCATGAAGCTAGGAATTGGAAGAAAATAGCTGCGTATCTTCCAGGGCGAACTGAAGTCCAATGCTTACATCGCTGGCAAAAAGTTTTGGATCCTGATCTTGTGAAGGGTTATTGGACAAAGGAGGAGGATGATCGCCTCACTGAGCTAGTAAGAAAGTATGGTTTGAAGAGATGGGCCGAACTTGCAAAATTCTTACCGGGTCGAATTGGGAAGCAATGCCGAGAGAGGTGGCACAATAATCTTGATCCAGCTATAAAGAAAGATGCATGGACGGAGGAAGAGGAATTGGCACTTGCTCACTATCACCAAATATATGGTAGTAAGTGGGCAATGATTGCAAGGTATCTTCCTGGAAGGTCTGACAACGCCATTAAAAATCATTGGAACCGCTCAATGAAAAAGAAAGGGGATGCATCTTCACATCTTGGTTTTGACCTAAATGTTGCTACTTCCAGTTTTCGCACATCTCCAATAGTGCCAGCTCATGTTTCAGTTAAAGTAGATAGCCATAGTTTCAATGAAATGGATTCGAAGCACAGGGTTGACAACTTCCCAACACACTTGGTTCTTCAAAAGTCCAGTAAATCTCCCAAACGACAGAAAGTTTCTTCCTCAGATGCTAAGAGAGACCAAGTTGGAAATGGAAGCAACAACAAAATCAACAGTACGTGCCATAATGCAGATGACATGAGTAACGACATAGGATGTGGGGACAATAATGACAGCAGAGATACTCCCACAATGTTTGAACAAAGTCCAGAACGTGTACTAAGAAGCTTAGCGATGACCTATGAGAATATTCCATCTATTATTAGGAAACGAACTCCCACCAAGGCTGAGTGTGCCCAAACTCCTGAAGACGAACGTGTTATTACTTTACAAAATTTAAAATTGAGCCGGGAGTTTATTCCATCCATTATTACTACACCAAACACTAAAGCCATAGCTAAATCTCTAGAAGGATACATGGAATGA 1185 0.4228 MMLEVETELEELSFEFDSSEGDGVHLCLSSSNCNCDATLLKSTPVSGSSKAEARRWSEEEDNLLIQIVKKHEARNWKKIAAYLPGRTEVQCLHRWQKVLDPDLVKGYWTKEEDDRLTELVRKYGLKRWAELAKFLPGRIGKQCRERWHNNLDPAIKKDAWTEEEELALAHYHQIYGSKWAMIARYLPGRSDNAIKNHWNRSMKKKGDASSHLGFDLNVATSSFRTSPIVPAHVSVKVDSHSFNEMDSKHRVDNFPTHLVLQKSSKSPKRQKVSSSDAKRDQVGNGSNNKINSTCHNADDMSNDIGCGDNNDSRDTPTMFEQSPERVLRSLAMTYENIPSIIRKRTPTKAECAQTPEDERVITLQNLKLSREFIPSIITTPNTKAIAKSLEGYME* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1018 394 Gene3D - 105 156 - -
Ahy15g1018 394 ProSiteProfiles Myb-like domain profile. 100 151 IPR001005 -
Ahy15g1018 394 CDD SANT 108 151 IPR001005 -
Ahy15g1018 394 CDD SANT 159 200 IPR001005 -
Ahy15g1018 394 SUPERFAMILY Homeodomain-like 54 109 IPR009057 -
Ahy15g1018 394 MobiDBLite consensus disorder prediction 258 321 - -
Ahy15g1018 394 PANTHER TRANSCRIPTION REPRESSOR MYB5 55 259 - -
Ahy15g1018 394 Gene3D - 158 213 - -
Ahy15g1018 394 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 156 206 IPR017930 -
Ahy15g1018 394 ProSiteProfiles Myb-like domain profile. 48 99 IPR001005 -
Ahy15g1018 394 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 100 155 IPR017930 -
Ahy15g1018 394 Pfam Myb-like DNA-binding domain 157 199 IPR001005 -
Ahy15g1018 394 Pfam Myb-like DNA-binding domain 105 151 IPR001005 -
Ahy15g1018 394 Pfam Myb-like DNA-binding domain 55 99 IPR001005 -
Ahy15g1018 394 SMART sant 156 204 IPR001005 -
Ahy15g1018 394 SMART sant 52 101 IPR001005 -
Ahy15g1018 394 SMART sant 104 153 IPR001005 -
Ahy15g1018 394 Gene3D - 52 104 - -
Ahy15g1018 394 ProSiteProfiles Myb-like domain profile. 152 202 IPR001005 -
Ahy15g1018 394 SUPERFAMILY Homeodomain-like 102 198 IPR009057 -
Ahy15g1018 394 MobiDBLite consensus disorder prediction 277 319 - -
Ahy15g1018 394 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 54 99 IPR017930 -
Ahy15g1018 394 CDD SANT 55 99 IPR001005 -
Ahy15g1018 394 PANTHER MYB PROTEIN-RELATED 55 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1018 Ahy-Chr15 15610254 15612740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g1018 45 205 MYB Transcription Factor Family AT5G02320 63.354 3.01e-71 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy15g1018 Myb_DNA-binding 2.50E-16 CL0123