Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1002 ATGGCGATTATGGAAATCAGAAATAAGAGGGTGGTGGAAGATGTTGCAATAATCGGAGGGTTGATCGGAGTCCAATTTATCTACGCAGGGAACGCTTTTCTGATGAGTTATGCTATGTCATTAGGCCTTAACTCTCTTACCATTGTTATTTTCACTTCCCTAGCTACCTTCCTTGTTCTCTTCCCCGTTGCCTTTTATTTTGAAAGGACTAAGTGGCCCAAGGAGTGCAAACTCAAGCTGATTATGCAACTCTTGTTTCTTTCATTTGGAGGACTAGCTTTCCAGTGTCTGTTTCTGAAAGGAATCAATCTAACTTCACCAGCAATGGGAACTGCAATGCCAAACCTTGCACCGGGTCTTATCTTCATCATGTCTTGGACTTTTGGGTTGGAGAGTGTAAACTTAAGGAACACACATAGCAAAGTAAAAATCTTAGGAACACTGCTATGTGTTTTTGGGGCTCTCACAATGAGCATAATGCAAACCATTTCTGCTCCTCCGGAAACCGGTTTTGAGGCTACAGTTCAATCATCATCGACGCCATTGCAGTTTGTCTTCGACAAGCACAAGATGATTGGCAGCCTCTATCTTGTCGCTGCAGTCTTCATACTGTCGAGCAGCGTAGTCCTGCAGGCTTTTGTTCTTGGAGATTTTGCGGCACCTATGTCCTTGGGTGCAATAACGTCCTTGTTAGGGGCCTTCATGACCGCAGTTTTTCAGTTACTTACAGAGCACCAAGTGAAAACTGATTGGCAAGTTCTGCGTTTTAAAGACCTAATTGGCTATTCTTTTCTGGCAGGTGTAGCGAGTGGAATATGTTTAAGCTTCAATGGTTGGGCACTTAAGAAGAAAGGACCAGTCTTGGTCTCCATGTTTAGCCCCATTGCTACAGTCTGCTCTGTCATTTTCTCCCTTGTTACCATGAGAGACACTATTAATTTTGGAAGCATTGCAGGTATGTTACTCATGTTCACTGGCCTGTACTTAGTTCTTTGGGCCAAAGACAAAGAAGGCAACGCAAGAGGAAATAATGGCAATGAGATTGAGAAGGCTTTTTTAAGTTGA 1065 0.4319 MAIMEIRNKRVVEDVAIIGGLIGVQFIYAGNAFLMSYAMSLGLNSLTIVIFTSLATFLVLFPVAFYFERTKWPKECKLKLIMQLLFLSFGGLAFQCLFLKGINLTSPAMGTAMPNLAPGLIFIMSWTFGLESVNLRNTHSKVKILGTLLCVFGALTMSIMQTISAPPETGFEATVQSSSTPLQFVFDKHKMIGSLYLVAAVFILSSSVVLQAFVLGDFAAPMSLGAITSLLGAFMTAVFQLLTEHQVKTDWQVLRFKDLIGYSFLAGVASGICLSFNGWALKKKGPVLVSMFSPIATVCSVIFSLVTMRDTINFGSIAGMLLMFTGLYLVLWAKDKEGNARGNNGNEIEKAFLS* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1002 354 Pfam EamA-like transporter family 192 331 IPR000620 GO:0016020|GO:0016021
Ahy15g1002 354 Pfam EamA-like transporter family 21 158 IPR000620 GO:0016020|GO:0016021
Ahy15g1002 354 PANTHER WAT1-RELATED PROTEIN 15 344 IPR030184 GO:0016021|GO:0022857
Ahy15g1002 354 PANTHER WAT1-RELATED PROTEIN 15 344 - -
Ahy15g1002 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 257 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1002 Ahy-Chr15 15388042 15391006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g1002 3 338 Nodulin-like Gene Family AT5G47470 55.752 5.41e-128 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1002 - - aprc:113870214 470.7