Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0906 ATGGCTTCATCATCATCTTCAAAGAGGCACCCGCTGTACCACGGAATCAGGTGTCGAGGAGGCAAATGGGTCTCCGAAATCCGGCAGCCACGTAAGGCTTCAAGAATATGGCTGGGGACGTTCCCCACGGCTGAGATGGCGGCTGCCGCCTACGACGTTGCCGCATTAGCACTCAAAGGCGACAGCGCCGTTCTCAACCTTCCTGAGTCAGCTGGAAAGTACCAAATTCCTGTTACTAACTCCCCTGATGACATCCGCAGGGCTGCCACTGCTGCTGCCGCTTTGATGAAGAAGAACCCTCAAGAACCCATCACCACTCCTCACATTATTACTGTTAATAATAATAATAATAATAATAATAATGATAATAACACTCTTGTTGATGGTATTAACAACAACGATATTATTAGTACGGCTTTGTGTTCATCATCATCATGGTATGAGGATAATGATTTCATGGACGAGGAAGCTATATTCCGCATGCCAAGTTTGCTGGTGGATATGGCTGAGGGCATGCTTCTGTCGCCGCCGAGAATAATACTGAGCCCATCTCCGCCATCGTACAACTCCGGTGACAGTTTGTGGAGTTACTTTTGA 597 0.4757 MASSSSSKRHPLYHGIRCRGGKWVSEIRQPRKASRIWLGTFPTAEMAAAAYDVAALALKGDSAVLNLPESAGKYQIPVTNSPDDIRRAATAAAALMKKNPQEPITTPHIITVNNNNNNNNNDNNTLVDGINNNDIISTALCSSSSWYEDNDFMDEEAIFRMPSLLVDMAEGMLLSPPRIILSPSPPSYNSGDSLWSYF* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0906 198 CDD AP2 11 70 IPR001471 GO:0003700|GO:0006355
Ahy15g0906 198 SMART rav1_2 12 74 IPR001471 GO:0003700|GO:0006355
Ahy15g0906 198 Pfam AP2 domain 13 60 IPR001471 GO:0003700|GO:0006355
Ahy15g0906 198 SUPERFAMILY DNA-binding domain 12 69 IPR016177 GO:0003677
Ahy15g0906 198 Gene3D AP2/ERF domain 12 69 IPR036955 GO:0003700|GO:0006355
Ahy15g0906 198 PANTHER ETHYLENE RESPONSE FACTOR 1 198 - -
Ahy15g0906 198 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 1 198 - -
Ahy15g0906 198 ProSiteProfiles AP2/ERF domain profile. 12 68 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0906 Ahy-Chr15 13396498 13397363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g0906 7 197 AP2-EREBP Transcription Factor Family AT5G52020 46.193 4.63e-43 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Ahy15g0906 AP2 3.60E-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0906 - - gmx:100811020 198.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g0906 15 13396498 13397363 Ahy15g0906 15 13396498 13397363 ECH