Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0883 ATGGAACAACAACAACAACATTCATCATCAGCAAACAGCAACAACAACAACAATGGTACTAGTAGTCACATGAACAGTGGTAGCAGGCAAAGCAGCACAAGGTGGACACCAACAACGGATCAGATAAGGATATTGAAGGATTTATACTACAACAATGGAGTAAGGTCTCCAAGTGCAGAACAGATTCAGAGGATCTCTGCTAGGCTTAGACAGTATGGTAAGATTGAAGGCAAGAATGTCTTCTACTGGTTCCAGAATCACAAGGCCCGTGAGAGGCAGAAGAAGAGGTTCACTTCTGATTCTACTACTACTATCAATGCCAATAATCTTCCACTTCCAACCATGCATAGAGGATCCACCATTAACAACAACAACAATGCTCCTAATTGTTGGAATAAACCTACTGAAGACATTACTACTACTACTACCTTTCATAGCAACAAGTATTATTCCAACAATATGCCATCATCAACTGGGATTGCATCTTCTTCTTCTTCTGCTGGGATGGTTGGTGTGGGCCAGATGGGGAATTATGGCTGTGGATCTGTTCCCATGGAGAAGAGTTTTAGGGAGTGTACAATATCTGCAGGTGGAGGAAGCAGTGTTGGTGGTGCCATAAACCACAACCTGGGATGGGTTGGTGTGGATCCTTATTCATCAACTTACACTGCTTTCTTTGACAAAATAAGGCCTGAGATTGAAACCCTTGAACAAGAACAAGGTGATGATAATAATGATGATGAAGAAATTGATGATGTCACTGAGATTGAAACCCTGCCTTTGTTCCCTATGCATGGTGAAGACATCCATGACTATTGCAGCCTCAGATCCAATAATTCTTCTTCTTCTTCTTTTAACTATGATCATCATCATCATGGATTCAACAACGGTGGTTCTCGTGCTTCCTTGGAGCTTAGTCTCAATTCCTACGGTCGCAAGTCTCCAGATTATGCTTGA 957 0.419 MEQQQQHSSSANSNNNNNGTSSHMNSGSRQSSTRWTPTTDQIRILKDLYYNNGVRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSDSTTTINANNLPLPTMHRGSTINNNNNAPNCWNKPTEDITTTTTFHSNKYYSNNMPSSTGIASSSSSAGMVGVGQMGNYGCGSVPMEKSFRECTISAGGGSSVGGAINHNLGWVGVDPYSSTYTAFFDKIRPEIETLEQEQGDDNNDDEEIDDVTEIETLPLFPMHGEDIHDYCSLRSNNSSSSSFNYDHHHHGFNNGGSRASLELSLNSYGRKSPDYA* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0883 318 CDD homeodomain 33 95 IPR001356 GO:0003677
Ahy15g0883 318 PANTHER PROTEIN WUSCHEL 1 312 - -
Ahy15g0883 318 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 312 IPR044555 GO:0003700|GO:0099402
Ahy15g0883 318 Pfam Homeodomain 32 93 IPR001356 GO:0003677
Ahy15g0883 318 MobiDBLite consensus disorder prediction 1 37 - -
Ahy15g0883 318 ProSiteProfiles 'Homeobox' domain profile. 28 94 IPR001356 GO:0003677
Ahy15g0883 318 MobiDBLite consensus disorder prediction 93 115 - -
Ahy15g0883 318 SMART HOX_1 30 98 IPR001356 GO:0003677
Ahy15g0883 318 SUPERFAMILY Homeodomain-like 11 95 IPR009057 -
Ahy15g0883 318 Gene3D - 24 93 - -
Ahy15g0883 318 MobiDBLite consensus disorder prediction 99 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0883 Ahy-Chr15 12995197 12997110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g0883 29 308 Wox Gene Family AT2G17950 40.753 5.75e-49 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Ahy15g0883 Homeodomain 1.40E-17 CL0123