Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0877 ATGAAGCGGGCAAGGAAATCGAAATCGAACAGGGTTTCGTGGGCTCCTGCGTCTAATTTGTGTCAGATCAAATTGTTTCTGTCTGACGACTGTCCTTCAAAAGTTGGACTGAAATCTCAAGATCATCTTCAAGCAAAGACATCTTCAATGTTGCCTTCAAGTACTAATGAACATATGGACTTACCTCCTGGATTTGAAGACAATCACTTCTTAAACCAGCCAAAGGTTGAACTCTCTCGCATCTCTCCAATTAAATGGGAGCGCCCTCCTCTGTTTGCTTTCAGACATGATTGGCGCGTTGCTGCTGGTGAAGAAAGTAAGGAGAAAATGGATCAAAAGCTAAGAGAAATGAAAGTGCTTGAAGCAGTTTATCCTCGCATTTCTGCCATACCTCCCAGCCCTTCTGTTTCTCATGATGTAGACAAGGAAGGTTATGATGATAACCACACTCCTCTCATCCCTATCATTCCCATTGAGGAGGAAGATTCGATGGATATTAATCCTGAAGTGTCAGACGCAAAACTCGCAGATACCCCCACTAAATTGCTGTCACAAAACTTGCAGCAATATATAGCAGCTGCAACACCTATTAATTCACAATGCAACACCTCTGCTGCTGTTCCCTTATCTGCAGGTGGAAACTCCATGCTGGCAATTTCTCCTGGTTCGGAACCAGATTTAGCTGCAGCCTCAGCTCTGGTAGCAGCAGCCATTTTGAAGAGTAATGAGCAAGGAAACCCAATTGATATGGATCTACTTGTTAAAATATTTAATGACCCAATAATGATAGAGAAATTGGTTAACCAACGGGGAACTGCAACCGCCACCATAACTACCTCTTCAAATACTGGGTTGAAATCTGCTGCTTCTGGGACTACACCCACAAGCACAGTTGGTTTAGTACCTTCTTCTGCTCCAAAGCAAGCAACTTCCTTAGCCTCCATGTTTCAATCTACACTTAATAAGCCAGCAATTCCCCCAGTTCCATTGTCTAGGCCTTCCTCTGGTAATTTAGTAACTAGCTCAGTTACCCTGCCTCCACAACCAACTACACAATCACCTTCACCTCCACCTCCACCTCCATCCACTTCTACATTTAATAAGCACAGGTCTGTCAACAATAACCATGTAACGAATGGAGCACTTCCCTCTTTAGAACCCCAGCCTCCTCCTCAAGATACAACTCTGTTATCTGGTATAAAGCGCACGTCATCATTACCTTGTGTGAATTCATCCAGTGAATTGAGCACAGTGCCTTTGAATTCAACTGCTGTGAATTTGCATGCAGGTGCGAACCAGGTGCGAGCAACGGCTGCCACAGTGGCTTATCAAACAAGTAGCACCGGTTCTTCTTTTGCAGTGAAGGATGCCAACTATTATAAGAACCTTATTAGGCAACATGGTGCAGATAAGCAAGACGGTCAAGAATCACTAATAGGTATCCGTCATAATAATTTCCAAGACTTTAAAATGCTACATAACCTTAAACAAAGGGAAGTGATATTCAAAAACCAGAAACCTTGCATATACTTTAACAGCTCAAGGGGTTGCCGAAATGGTGCAAATTGCCCCTATCAGCATGATATCTCAGCTCAGTGGGGAGCTGGTAATGACCTAGTGGCACAAAATGCAAAAAGAATGAAACTAGGTACAGAAGTTAATGGGAGGATATAA 1674 0.4319 MKRARKSKSNRVSWAPASNLCQIKLFLSDDCPSKVGLKSQDHLQAKTSSMLPSSTNEHMDLPPGFEDNHFLNQPKVELSRISPIKWERPPLFAFRHDWRVAAGEESKEKMDQKLREMKVLEAVYPRISAIPPSPSVSHDVDKEGYDDNHTPLIPIIPIEEEDSMDINPEVSDAKLADTPTKLLSQNLQQYIAAATPINSQCNTSAAVPLSAGGNSMLAISPGSEPDLAAASALVAAAILKSNEQGNPIDMDLLVKIFNDPIMIEKLVNQRGTATATITTSSNTGLKSAASGTTPTSTVGLVPSSAPKQATSLASMFQSTLNKPAIPPVPLSRPSSGNLVTSSVTLPPQPTTQSPSPPPPPPSTSTFNKHRSVNNNHVTNGALPSLEPQPPPQDTTLLSGIKRTSSLPCVNSSSELSTVPLNSTAVNLHAGANQVRATAATVAYQTSSTGSSFAVKDANYYKNLIRQHGADKQDGQESLIGIRHNNFQDFKMLHNLKQREVIFKNQKPCIYFNSSRGCRNGANCPYQHDISAQWGAGNDLVAQNAKRMKLGTEVNGRI* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0877 557 MobiDBLite consensus disorder prediction 281 303 - -
Ahy15g0877 557 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED 1 549 - -
Ahy15g0877 557 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 1 549 - -
Ahy15g0877 557 MobiDBLite consensus disorder prediction 333 348 - -
Ahy15g0877 557 ProSiteProfiles Zinc finger C3H1-type profile. 502 530 IPR000571 GO:0046872
Ahy15g0877 557 MobiDBLite consensus disorder prediction 349 364 - -
Ahy15g0877 557 MobiDBLite consensus disorder prediction 365 382 - -
Ahy15g0877 557 MobiDBLite consensus disorder prediction 324 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0877 Ahy-Chr15 12823730 12828900 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Ahy15g0877 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0877 - - adu:107488052 1020.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g0877 15 12823730 12828900 Ahy15g0877 15 12823730 12828900 ECH
Ahy15g0877 15 12823730 12828900 Ahy17g2306 17 111044449 111047974 ECH