Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0862 ATGGAGCAACAACAGCTTCAGCAGAGTGGAGCTGCCACCGCCGGAGCAGCACCGCCGGTGGAGGGAGCTAGGGATTTGGGAGATTCGAAGACAGTTGGAGTTCCCGCTGCGGTTGCCGGCGATGTTGTCATGGCGGAGAGGGACGGCGGCGCCACGGCGGTTAAGAGGAAGCGGGGCCGTCCGGCGAAGGGTGCTCCGAGGGCGTCGGCGGCGGGAGCGGCCGCGAGGCTGCAGCAGAAGAAGGAGGAAGAGGAAGAGGAGGATGTTTGCTTCATATGCTTCGATGGTGGAAGCTTAGTTCTTTGTGATCGCCGGGGTTGTCCGAAAGCGTATCATCCCGCGTGTATTAAGCGAGACGAGGCCTTCTTCCGTTCAAAGGCCAAATGGAATTGCGGTTGGCATATATGTAGCTTTTGTCAGAAGGCCTCCCAATTTTTGTGCTATACTTGTACATATTCGGTGTGCAAGAGTTGTACAAAATATGCTGATTTTGTGTGTGTCAGAGAAAATAAAGGTTTGTGCGGAATATGCATGAGAACTATAATGCTGATTGAAAACAATGGCCAGGGAAATACGGAGAAGTGTGAAGTGGATTTTGATGACAAAACCAGCTGGGAATATCTTTTCAAGGTGTATTGGATGTTTTTGAAAGGGAAGATATCTTTAACATTTGATGAGCTCCTTCGAGCTAAAAACCCCTGGACAGGTGTTTCTCCATTGGGTGGTAAGGTTGAATGTCACCGTGAAATTTATAATACTAAGGATGACAAAGGTTCTGGTTCAGAGAACTCCTGTATTGACATAGAATCAAATAATTTGAAAAACAAGAAATCTAGGAGACAGCCAATGCTTCATAGCAATGGGGTTGGCTCCGATATGATAACTTCAGCCGGTGACAACTGTGTGCCTTTGCCTGAATGCTCAAATTGGGCATCAAAGGAGCTTCTAGAGTTTGTTGCACATATGAAAAGTGGTGATACATCTCGCCTGTCTCAATTTGATGTCCAGGGTCTCTTGTTAGAGTATGTGAAGAAGAACAATCTTCGAGACCCCCAGCAGAAATGCCAAATTGTTTGTGATCATAGACTACTAAAATTGTTTGGAAGAGCACGTGTTGGTCACATTGAAATGTTAAAGCTCCTTGAACCCCACTTTCTTACAAAAGAGAATGGCCCTGCAGAAGATACACTTAGAGCAGGAGTCACGAACACTGTTGCTAGCGAAGGGGAGGCAAAAGACAATTGCAATAAGCAGTTGATTTCAGTTGATGATAAGGAATGTAAAACAGATAAAAAAGATGATGTGCATTTGCCACAAAATAATCCAGATGTGTATGCTGCAATAAATGCTCACAACATTAACTTGATCTACCTGCGGCGAAGTCTTTTGGAAAATCTAACTGAAGATGCTGAAAGTGTTCGTGACAAGGTTGTTGGTTCATTTGTGCGGATAAGGATCACTAGTAGTGACAAAAAACAAGAGATGTATAGGCTTGTGCAAGTTGTAGGTACAAGTAAGGCTGCTGAGCCTTACAAAATTGGAACAAGAACAACTGATATGATGCTTGAGATTTTAAACTTAAATAGGAAGGAGGCCATATCAATAGATGAGATTTCAAATCAGGAGTTCTCTGAGGATGAATGCAAGCGTTTGCGTCAAAGTATAAAATATGGGCTTTCCAATAGATTGACTGTGGGTGAGATCATGGACAAAGCATTGACATTTCAAGCAATGAGAGTTAATGATTTGCTGGAAGCTGAGATACTGCGGCTTACTCATCTTCGTGATAGAGCAAGTGAAAAAGGGCATAGAAAAGAGCTCAGAGAATGTGTGGAGAAGTTACAGCTACTAAACACACCAGAGGAACGACAGCGCAGGATGCGTGAAATTCCAGAGGTACACTCTGACCCAAATCTGGATTTGATGTTCGAGTCTGATGAAGATGCAGGAGAGTCAGATGAAAGGAAGCAAGATGGAAATATATGGTCGAAGTATCCTGGTTTTGACAGAAAAGAGAAGGAGCCCACTTTGCCTAAAAGTTGTGATAGTGTCTTGAATGATGATGGATGCAAAACACAAGATTTTTCTGCTGCTGTCCATGAACAGAGTGGCAATGCCTGCGTGACAAAAAGTCAGATAAAACCTAATGATACAGTGTTTGATGATAACCCTAATGTAGTTGTGAAATCAGAACCATCTGGTGTTGCGTTGGACATTTCATCGTCTCCTCAATCTGTAGGGGTAGAACAGTCATTCAATGATTTTGTGAATGATAAATCATGGCATTATCAGGACCCAACTGGGAAGGTTCAAGGACCTTTTTCCATGTTGCAACTGTTTAAGTGGAATGCAAGTGGAGGTTTCCCTCCTAATCTCAGGATATGGAGGATAAATGAAAAACAAGATAGCTCTATATTGTTAACCGATGCCCTAAGTGGGAAGTGTTCCAAAAATGTGTCAATGCCATATTTCAGCCAACTGCTGTCTTTGGGGATCAGTGGTACAGTGGATACCAAAGAGGATATTAAAGATTATAGTCAGGATGGTTGCAGCACTGCAGCAAGGAATGAAACTCGTTCAGACAACCAAATTAATGAGCAGAACAGGGAGCTAAAGGTGGATGATACTCGTACCCAGTCTGATGGTAAAGATGAATCTGTTAGGAGCAATGGATGGCAGGAACAGCCCCATGCATACCATCCACAACCTTCAGTGGCCATTTCTGAGAATATGAAGGAGAATTCTGATAAATTAAATGAAGGTAATCGGATTGGGGGAAACTCTGCAGATAAAGGGAATCCTGGTTTGAACAGGACTTCTGATGGTCAGAGTAACAGTGGGCAGAGTTACCAGAAGCAATCATACAGTGAAGATAATTCAGGGCAATCTTCTGAACAGAACTGGAGAGGCCCTCGTGTTAACAATTCTTCCAATTGTGTGGTTACCACATCAGCTGAAGTTTTGGTTACAAAGACATCACCACCTAAGCTAGGATTTGATTTACATAGTTCTCCATCCCATCCTGACCAGAACTGGATAGGCCCTCATGTAAATACTTCTTCTGATTGTGTGGTTCCCACATCAGCTGAAGTTTCTGTGCCAAAGACATCACCACCTAAGCTAGGATTTGATTTGCATATTCCTCCATCACAGCTTGAACAAGACTGGAGAGACCCTCATGTAAATACTAATTCCAATTGTGTGGTTACTACATCAGCTGAAGTTTCTGTGACAAAGATATCACCACTTAAGCTAGGATTTGATTTGCATAGTCCCCCATCCCATCCTTCGACGTGGCAAGCATTCATCGGTGAGACCACTGACTTTAGCTCATTAGTTGACGTTGATGAATCAGTCTCAGATCTGTTAGCTGAGGTGGAAGCAATGGAATCACTTGGTGGTGGTGGTGGTGGTGGCGGCGGTGGCTTGGAATCTCCCACTTCAATCATGAAATGTGGTGAGGAATTGACTGACAGTTCTAAAAATGATTGCCTCAGTTTTGCAGACGGGCTTAGCCCAGTACTTGATGCAGGTAAAGGTGATGCACTTAGCTCCACTGGTGATTTGCACTTGCAATCTCAGTCAACAGCAGCAGAGGAACCATTGCGGCAAGCAGATATACATCATCATCATCATCATCATCATCATCATCAGAGAGTATCTGGGGAACATTCTTCAAGGAGTTCTGAAGTTAAGGTGGGTACAAAGAGCATTAGTGTTTCAGGTTATCAATGGGAATCAGGCTCAGAAAATTCAACCATTGGTCCATCGACTGCAACCTGGAGCATTGCTACAGACCCCACTTGGAGAGTCGGGTCAGAGAATACAAACTTGGGATGGAGTGGAATGGATAGAGGAAATGTGAACATTGGCTGGGGAGTGGGGCAGTCAGCAGTGCAGGAGAACAGGAGCACAAGTTCATACACTCCTACAGTTTCTCCAAGCTTTGGTGGAAGTCAAGCAAGATATGGCAGCGATCGACCTTCTGTGCCTAGAGATCGGGGTTTTCATGGTCATGGTAGGGAATCAGCTGTTGCTAGAGGCAGAACTGCGTGGAACCGGCAAACTTCAGTTGGTGTTGGAAACGGAGGCTCACACAGGCCTCTGCCCAAAGGGCAACGAGTCTGTAAATTTTATGAAAGTGGGCGCTGTAAGAAGGGGGCATCCTGTGATTACTTCCACCCATGA 4188 0.4439 MEQQQLQQSGAATAGAAPPVEGARDLGDSKTVGVPAAVAGDVVMAERDGGATAVKRKRGRPAKGAPRASAAGAAARLQQKKEEEEEEDVCFICFDGGSLVLCDRRGCPKAYHPACIKRDEAFFRSKAKWNCGWHICSFCQKASQFLCYTCTYSVCKSCTKYADFVCVRENKGLCGICMRTIMLIENNGQGNTEKCEVDFDDKTSWEYLFKVYWMFLKGKISLTFDELLRAKNPWTGVSPLGGKVECHREIYNTKDDKGSGSENSCIDIESNNLKNKKSRRQPMLHSNGVGSDMITSAGDNCVPLPECSNWASKELLEFVAHMKSGDTSRLSQFDVQGLLLEYVKKNNLRDPQQKCQIVCDHRLLKLFGRARVGHIEMLKLLEPHFLTKENGPAEDTLRAGVTNTVASEGEAKDNCNKQLISVDDKECKTDKKDDVHLPQNNPDVYAAINAHNINLIYLRRSLLENLTEDAESVRDKVVGSFVRIRITSSDKKQEMYRLVQVVGTSKAAEPYKIGTRTTDMMLEILNLNRKEAISIDEISNQEFSEDECKRLRQSIKYGLSNRLTVGEIMDKALTFQAMRVNDLLEAEILRLTHLRDRASEKGHRKELRECVEKLQLLNTPEERQRRMREIPEVHSDPNLDLMFESDEDAGESDERKQDGNIWSKYPGFDRKEKEPTLPKSCDSVLNDDGCKTQDFSAAVHEQSGNACVTKSQIKPNDTVFDDNPNVVVKSEPSGVALDISSSPQSVGVEQSFNDFVNDKSWHYQDPTGKVQGPFSMLQLFKWNASGGFPPNLRIWRINEKQDSSILLTDALSGKCSKNVSMPYFSQLLSLGISGTVDTKEDIKDYSQDGCSTAARNETRSDNQINEQNRELKVDDTRTQSDGKDESVRSNGWQEQPHAYHPQPSVAISENMKENSDKLNEGNRIGGNSADKGNPGLNRTSDGQSNSGQSYQKQSYSEDNSGQSSEQNWRGPRVNNSSNCVVTTSAEVLVTKTSPPKLGFDLHSSPSHPDQNWIGPHVNTSSDCVVPTSAEVSVPKTSPPKLGFDLHIPPSQLEQDWRDPHVNTNSNCVVTTSAEVSVTKISPLKLGFDLHSPPSHPSTWQAFIGETTDFSSLVDVDESVSDLLAEVEAMESLGGGGGGGGGGLESPTSIMKCGEELTDSSKNDCLSFADGLSPVLDAGKGDALSSTGDLHLQSQSTAAEEPLRQADIHHHHHHHHHHQRVSGEHSSRSSEVKVGTKSISVSGYQWESGSENSTIGPSTATWSIATDPTWRVGSENTNLGWSGMDRGNVNIGWGVGQSAVQENRSTSSYTPTVSPSFGGSQARYGSDRPSVPRDRGFHGHGRESAVARGRTAWNRQTSVGVGNGGSHRPLPKGQRVCKFYESGRCKKGASCDYFHP* 1396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0862 1395 SMART rtf1 447 557 IPR004343 GO:0003677
Ahy15g0862 1395 CDD SWIB-MDM2_like 310 385 - -
Ahy15g0862 1395 Pfam Plus-3 domain 452 555 IPR004343 GO:0003677
Ahy15g0862 1395 Gene3D SWIB/MDM2 domain 304 393 IPR036885 -
Ahy15g0862 1395 ProSiteProfiles Zinc finger PHD-type profile. 87 153 IPR019787 -
Ahy15g0862 1395 ProSiteProfiles SWIB/MDM2 domain profile. 304 387 IPR003121 -
Ahy15g0862 1395 ProSiteProfiles Zinc finger C3H1-type profile. 1370 1395 IPR000571 GO:0046872
Ahy15g0862 1395 SUPERFAMILY CCCH zinc finger 1370 1394 IPR036855 GO:0046872
Ahy15g0862 1395 MobiDBLite consensus disorder prediction 649 678 - -
Ahy15g0862 1395 MobiDBLite consensus disorder prediction 849 977 - -
Ahy15g0862 1395 Coils Coil 67 87 - -
Ahy15g0862 1395 MobiDBLite consensus disorder prediction 862 890 - -
Ahy15g0862 1395 Pfam SWIB/MDM2 domain 312 385 IPR003121 -
Ahy15g0862 1395 CDD PHD5_NSD 89 134 - -
Ahy15g0862 1395 MobiDBLite consensus disorder prediction 1 31 - -
Ahy15g0862 1395 MobiDBLite consensus disorder prediction 646 680 - -
Ahy15g0862 1395 SUPERFAMILY Plus3-like 448 575 IPR036128 GO:0003677
Ahy15g0862 1395 SMART gyf_5 759 814 IPR003169 GO:0005515
Ahy15g0862 1395 MobiDBLite consensus disorder prediction 49 80 - -
Ahy15g0862 1395 ProSiteProfiles Plus3 domain profile. 447 580 IPR004343 GO:0003677
Ahy15g0862 1395 MobiDBLite consensus disorder prediction 1207 1221 - -
Ahy15g0862 1395 Pfam GYF domain 761 801 IPR003169 GO:0005515
Ahy15g0862 1395 MobiDBLite consensus disorder prediction 932 977 - -
Ahy15g0862 1395 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44 21 1395 - -
Ahy15g0862 1395 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 74 179 IPR013083 -
Ahy15g0862 1395 SMART swib_2 312 390 IPR019835 -
Ahy15g0862 1395 Coils Coil 581 601 - -
Ahy15g0862 1395 Gene3D - 760 816 IPR035445 -
Ahy15g0862 1395 MobiDBLite consensus disorder prediction 1186 1200 - -
Ahy15g0862 1395 CDD GYF 758 813 IPR003169 GO:0005515
Ahy15g0862 1395 MobiDBLite consensus disorder prediction 1301 1322 - -
Ahy15g0862 1395 SUPERFAMILY SWIB/MDM2 domain 310 387 IPR036885 -
Ahy15g0862 1395 MobiDBLite consensus disorder prediction 1301 1371 - -
Ahy15g0862 1395 SUPERFAMILY FYVE/PHD zinc finger 83 144 IPR011011 -
Ahy15g0862 1395 MobiDBLite consensus disorder prediction 1327 1344 - -
Ahy15g0862 1395 Gene3D - 448 577 IPR036128 GO:0003677
Ahy15g0862 1395 ProSitePatterns Zinc finger PHD-type signature. 90 150 IPR019786 -
Ahy15g0862 1395 MobiDBLite consensus disorder prediction 1179 1237 - -
Ahy15g0862 1395 ProSiteProfiles GYF domain profile. 758 812 IPR003169 GO:0005515
Ahy15g0862 1395 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44-RELATED 21 1395 - -
Ahy15g0862 1395 SMART PHD_3 89 135 IPR001965 -
Ahy15g0862 1395 SUPERFAMILY GYF domain 756 811 IPR035445 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0862 Ahy-Chr15 12510970 12518419 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g0862 87 167 PHD Transcription Factor Family AT4G14920 35.802 1.46e-07 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-BAF60b Ahy15g0862 Plus-3 1.20E-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0862 - - gmx:100801151 1860.5