Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0840 ATGGCAGGTTTGTTCTCACTAGGCGGTGGTAGTAGTAGTAGTAGTGGTAGAGGAGGGAGAGGGAACACAAACCAACAACAACAACACGACCAACACCAACAACACGCGGAAATTCCTCCCTCCGACACCTTTTACTGGTACAAGAATGAAGACGTTTCCTCGTACCGAGGTGGCTTGGAGCTGTGGAACCATCATCATCATCATCACCAACCGGAACACGACCTCATACCTCAAGCAAGGCCTCTCTTCCACCAAGATCTTTACAGCTCCGCGGCTGCTCTAGGAGTGGGTCCAACCACTGTGTCCGACGATCAGTCACCCTCGAGATCGGCCTTCCTGGTGACGGCGTCGGCCGTGGGGAGCGGAGCAGCAAGCGGAGCAGGAAGTGGAGCAGGTGGGATTAGCTGCCAGGACTGCGGGAACCAGGCGAAGAAAGATTGCCCTCACATGCGGTGCAGGACATGCTGCAAGAGCCGTGGCTTCGATTGCCAAACCCATGTCAAGAGCACTTGGGTTCCCGCTTCCAAGCGCCGCGAGAGGCAGCAGCAACTCGCCTCTATCCAACAACAACAGCTTCTTGCTGCTGATGTTCCCAAGCGCCAAAGAGATCATGCCTCTAGTACTCGTTTACCCACAAACCCTTCTCCTTCAGCCTCAGCTTCAGGGATGGAGAATTTTCCTGCAGTAGTGAGCTCTCCAGCTGAATTCAGATGCGTACGTGTGAGCGGAATCGACGACACAGAAGACGAGTATGCATATCAAACGGCAGTCAACATTGGAGGACACGTCTTCAAAGGGATCCTCTATGACCAGGGTCCAGATCACGCAACCACCACCACCACCAACAGCAGCAGCTACGTCGCCGGAGACACCTCCTCCACCGGCGCTGCTGCTCATCACCCTAATCTCAACCTCATTGCTCCCAACACCAACACCACAACTTCAGCTCTCGTCTCCGCTGCACACACAACGCAGCAGCTCGTAGATCCTTCATCCATGAATCCACCTCCTCCTCTCAGCACCTTCATGGCTGGTAGTAGCGGTACGCAATTCTTCCCTCATCCAAGATCTTGA 1074 0.5456 MAGLFSLGGGSSSSSGRGGRGNTNQQQQHDQHQQHAEIPPSDTFYWYKNEDVSSYRGGLELWNHHHHHHQPEHDLIPQARPLFHQDLYSSAAALGVGPTTVSDDQSPSRSAFLVTASAVGSGAASGAGSGAGGISCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVPASKRRERQQQLASIQQQQLLAADVPKRQRDHASSTRLPTNPSPSASASGMENFPAVVSSPAEFRCVRVSGIDDTEDEYAYQTAVNIGGHVFKGILYDQGPDHATTTTTNSSSYVAGDTSSTGAAAHHPNLNLIAPNTNTTTSALVSAAHTTQQLVDPSSMNPPPPLSTFMAGSSGTQFFPHPRS* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0840 357 PANTHER PROTEIN SHORT INTERNODES 1 355 - -
Ahy15g0840 357 MobiDBLite consensus disorder prediction 1 41 - -
Ahy15g0840 357 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 355 IPR007818 GO:0003700|GO:0006355
Ahy15g0840 357 MobiDBLite consensus disorder prediction 174 195 - -
Ahy15g0840 357 MobiDBLite consensus disorder prediction 207 224 - -
Ahy15g0840 357 MobiDBLite consensus disorder prediction 7 38 - -
Ahy15g0840 357 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 226 273 IPR006511 -
Ahy15g0840 357 Pfam Domain of unknown function (DUF702) 133 274 - -
Ahy15g0840 357 MobiDBLite consensus disorder prediction 174 224 - -
Ahy15g0840 357 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 135 177 IPR006510 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0840 Ahy-Chr15 12061484 12064121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g0840 1 345 C2H2 Transcription Factor Family AT5G66350 43.889 8.24e-85 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Ahy15g0840 DUF702 1.80E-66 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0840 - - ahf:112720334 348.591