Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0812 ATGTTGAACCTGCAGCAGAAGAAAAGCGAGGCTCATGCTCTTCCAATGGCCGCTCAAGATGATCCCATGCTGCTTCCCACCCTCTCTCCCCCCAACACCTACCAAGCTGTCGTCAACGGCGGCACCTTTGACCGATTGCACGATGGCCACCGCCTCTTCCTCACCGCTTCAGCACAGTTGGCAAGGCACCGGATTGTGATCGGAGTTTGCGATGGACCAATGCTCGCAAAGAAGCAGTTTGCTGAACTGATACAGCCTATTGAGGAAAGGATACACAATGTTAAAACTTTCATAAAGTCTATCAAGCCAGAACTGGAAGTGCAAGCTGTACCAATCACAGATCCTTATGGGCCTTCTATCGTGGATGCAGATTTGGAGGCTGTGGTTGTAAGCAAAGAGACAGTACCTGGAGGATTAGCAGTAAACAGGAAAAGAGCTGAAAGAGGCCTTTCACAGTTAAAGATTGAAGTTGTAGATTTGGTCTCTGGAGGTTCGGGTGAAGTTAAGCTGAGTTCATCAATGTTAAGGAAGCTTGAGGCTGAAAAAGTCAACCAGCAAAGCACAATATCACAGACTTTTTTGAATTTTTTTTCAAAGATGAATGATCTGATGACGAAATCGTTCTTAAGTTATGTTGAACTGAAGAAACAGGTCATGAAGGACCTTGAAAATGAACGTGATATTGAAGCAGGGCAACTCAACCCCACACAACTAGAAGACCCTAATCTCACTCAGTTCTTCCAAGAAGTGGATGCAATCAAGGTTGAAATGGAAGAGATCACCAATCTCTTATTTGATCTTCAGCAACTGAATGAAGAAGCAAAGTCCACACACAGTGCAAAAGTCCTCCGTGGACTAAGAGACCGCATGGAATCTGACATGGTTGCGGTGCTTCGCAAGGCCAAGATCATCAAGGCAAGGCTTGAGGTCCTGGACCAATCCAACATAGCCAATAGAAATTTATCAGAGTCCTATAAAGAGGGTACACCAATTGATAGGACAAGGAGTTCTGTCACAAATGGTTTGAGGGTCAAGCTTAGGGACATGATGAATGAGTTTCAGTCCTTGAGGGACAAGATACTGTCTGATTACAAGGAAGATTTGAAGAGAAGGTACTACAGTGCGACCGGCGAGGTTCCGAGTGAAGAGGTCATGGACAAGATGATCTCAGGGAGTCTCAAAGTTGAGTTTTTGGCTGGGAAAACAGATGCTGACATGGGAACTCAGGTTAGACATGAGGCTGTGATGGATATTCAGAGGAGTTTGAACAAGCTTCACCAAGTGTTTCTTGATATGGCTATTCTGGTTGAGACACAAGGGGAGAAATTGGACAATATTGAAGATAATATGGCCAGTGCTGGTAACTACATCCATGGTGGAACTAATAGTCTTTACTATGCCAATCAGATGAAGAAGAAGAACCATAAATGGTGGTGCTGGGTTTGTGCTGTTGGGTTGATTGTGCTGTTGGTGTGCTTCATAGCAATGTTGACTTCTTGA 1500 0.4467 MLNLQQKKSEAHALPMAAQDDPMLLPTLSPPNTYQAVVNGGTFDRLHDGHRLFLTASAQLARHRIVIGVCDGPMLAKKQFAELIQPIEERIHNVKTFIKSIKPELEVQAVPITDPYGPSIVDADLEAVVVSKETVPGGLAVNRKRAERGLSQLKIEVVDLVSGGSGEVKLSSSMLRKLEAEKVNQQSTISQTFLNFFSKMNDLMTKSFLSYVELKKQVMKDLENERDIEAGQLNPTQLEDPNLTQFFQEVDAIKVEMEEITNLLFDLQQLNEEAKSTHSAKVLRGLRDRMESDMVAVLRKAKIIKARLEVLDQSNIANRNLSESYKEGTPIDRTRSSVTNGLRVKLRDMMNEFQSLRDKILSDYKEDLKRRYYSATGEVPSEEVMDKMISGSLKVEFLAGKTDADMGTQVRHEAVMDIQRSLNKLHQVFLDMAILVETQGEKLDNIEDNMASAGNYIHGGTNSLYYANQMKKKNHKWWCWVCAVGLIVLLVCFIAMLTS* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0812 499 Gene3D HUPs 36 186 IPR014729 -
Ahy15g0812 499 SMART SynN_4 238 365 IPR006011 GO:0016020
Ahy15g0812 499 Coils Coil 253 277 - -
Ahy15g0812 499 PANTHER SYNTAXIN-112 203 495 - -
Ahy15g0812 499 Gene3D - 239 368 - -
Ahy15g0812 499 SUPERFAMILY Nucleotidylyl transferase 37 180 - -
Ahy15g0812 499 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 405 467 IPR000727 -
Ahy15g0812 499 PANTHER SYNTAXIN 203 495 IPR045242 -
Ahy15g0812 499 CDD PPAT_CoAS 37 177 - -
Ahy15g0812 499 CDD SynN 246 393 IPR006011 GO:0016020
Ahy15g0812 499 Gene3D - 401 498 - -
Ahy15g0812 499 Pfam Cytidylyltransferase-like 40 110 IPR004821 GO:0003824|GO:0009058
Ahy15g0812 499 SUPERFAMILY t-snare proteins 240 460 IPR010989 GO:0016020|GO:0016192
Ahy15g0812 499 CDD SNARE_syntaxin1-like 409 464 - -
Ahy15g0812 499 SMART tSNARE_6 400 467 IPR000727 -
Ahy15g0812 499 Pfam Syntaxin 245 440 IPR006011 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0812 Ahy-Chr15 11433935 11439408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g0812 200 499 SNARE and Associated Proteins AT2G18260 58.958 1.81e-128 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0812 K08486 - cit:102608467 663.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g0812 15 11433935 11439408 Ahy15g0812 15 11433935 11439408 ECH