Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0766 ATGCCGGTTGATTTAGACAATGTTTCAACAGCTTCAGGGGAAGCTAGTGTTTCTTCCTCTGGCAATCAGACAGTACCTTCAAAATCAGCCACCAAGAAAAAGCGTAACCTTCCAGGAATGCCAGATCCAGATGCAGAGGTGATTGCTCTGTCTCCGAAGACCCTATTGGCGACGAACAGATTCGTGTGCGAAATCTGCAACAAGGGTTTCCAGAGGGATCAGAACCTTCAGCTCCATCGAAGGGGTCACAACCTTCCATGGAAGCTGAGGCAGAGGTCGAGCAAGGAGGTGAAGAAGAGGGTGTACGTGTGCCCTGAGCCAACGTGCGTTCACCACGATCCTTCACGCGCGCTCGGGGATCTCACCGGAATCAAGAAGCACTTCTGCAGAAAGCACGGCGAGAAGAAGTGGAAATGCGACAAGTGCTCTAAGAAATACGCTGTTCAATCAGATTGGAAGGCTCACTCTAAGATTTGCGGCACTAGAGAGTACAAATGCGATTGTGGCACTTTGTTCTCAAGGAGGGATAGCTTCATCACGCATAGGGCTTTTTGTGATGCCTTGGCCGAGGAAAGTGCGAGATCTCAAACTCATTCACAAACTACTCAGTCTCAGATTGGTGTTAAGGTTAGTTCTGAATCAGATTCTAAGGCTGTTAACGCTGAATCTTCGTCGCCTCAGGCGACACCTCCACCTCCTGCTCCTACTCCTGCTCCTGCTCCTCCACCGCCGCCGCCTCCTCCGGTTCAGCCGGAAGCTCCGCCACTGCCGGCCACTACTACTACTACTACCACCACCCAGCCAAACAGTGTTGTTGTGCCACTGGTTTTGCAGACTCAGAATCCAGAGTTGCCAGAAAATTCGCCACAAATCATAGAGGAGCCACAAGCTAACACTGCTCTGAATGGGAGCTGTAGCAGCAGCACTAGCTCAACAAGCAATGGTGGTACTAGCAGCAGTGTATTTGCAAGTTTGTTCGCTTCATCAACTGCGTCGGGAGGGCAGGACCGCCGCCAATATGCACCACCGCCACAGCCAACCATGTCTGCCACTGCTTTGCTGCAAAAAGCAGCTCAAATGGGTGCGGCTGCAACCAATGCCTCGCTGCTTCGTGGTTTAGGTATAGTGTCCTCTTCTGCTTCGTCTTCACCAGCTCAGCAAGATGGCTTGCAATGGGGTCAGCAGCCGGCCGAACCAGAGAGTGCCTCAGTTCCGGCGGGGCTTGGACTTGGGCTGTCTTTTGACAGTGGCTCTGGACTAAAGGAATTAATGATGGGGACTCCTTCCATGTTTGGTCCAAAGCATACCACCCTCGATTTTCTAGGATTGGGGATGGCTGCTGGAGGAACTCCTGGTGGAGGCTTGTCGGCACTCATCACATCTATTGGTGGTGGTTTGGATGTTAGTGCTGCGGCAGCAGCATCTTTTGGAAACGGAGAGTTTTCTGGCAAAGACATTGGGCGGAGCACATGA 1473 0.5207 MPVDLDNVSTASGEASVSSSGNQTVPSKSATKKKRNLPGMPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSKEVKKRVYVCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTLFSRRDSFITHRAFCDALAEESARSQTHSQTTQSQIGVKVSSESDSKAVNAESSSPQATPPPPAPTPAPAPPPPPPPPVQPEAPPLPATTTTTTTTQPNSVVVPLVLQTQNPELPENSPQIIEEPQANTALNGSCSSSTSSTSNGGTSSSVFASLFASSTASGGQDRRQYAPPPQPTMSATALLQKAAQMGAAATNASLLRGLGIVSSSASSSPAQQDGLQWGQQPAEPESASVPAGLGLGLSFDSGSGLKELMMGTPSMFGPKHTTLDFLGLGMAAGGTPGGGLSALITSIGGGLDVSAAAAASFGNGEFSGKDIGRST* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0766 490 MobiDBLite consensus disorder prediction 191 270 - -
Ahy15g0766 490 SUPERFAMILY beta-beta-alpha zinc fingers 60 157 IPR036236 -
Ahy15g0766 490 MobiDBLite consensus disorder prediction 226 255 - -
Ahy15g0766 490 ProSiteProfiles Zinc finger C2H2 type domain profile. 61 83 IPR013087 -
Ahy15g0766 490 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 340 489 - -
Ahy15g0766 490 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 7 326 - -
Ahy15g0766 490 MobiDBLite consensus disorder prediction 9 31 - -
Ahy15g0766 490 PANTHER PROTEIN INDETERMINATE-DOMAIN 2-LIKE 7 326 - -
Ahy15g0766 490 MobiDBLite consensus disorder prediction 378 405 - -
Ahy15g0766 490 PANTHER PROTEIN INDETERMINATE-DOMAIN 2-LIKE 340 489 - -
Ahy15g0766 490 MobiDBLite consensus disorder prediction 256 270 - -
Ahy15g0766 490 SMART c2h2final6 61 83 IPR013087 -
Ahy15g0766 490 SMART c2h2final6 102 132 IPR013087 -
Ahy15g0766 490 SMART c2h2final6 137 157 IPR013087 -
Ahy15g0766 490 ProSitePatterns Zinc finger C2H2 type domain signature. 63 83 IPR013087 -
Ahy15g0766 490 Gene3D Classic Zinc Finger 41 107 - -
Ahy15g0766 490 MobiDBLite consensus disorder prediction 1 44 - -
Ahy15g0766 490 Gene3D Classic Zinc Finger 115 198 - -
Ahy15g0766 490 MobiDBLite consensus disorder prediction 192 225 - -
Ahy15g0766 490 MobiDBLite consensus disorder prediction 378 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0766 Ahy-Chr15 10446355 10450275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g0766 1 490 IDZ Gene Family AT5G66730 57.301 5.30e-179 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy15g0766 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0766 K25869 - gmx:100806404 672.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g0766 15 10446355 10450275 Ahy15g0766 15 10446355 10450275 ECH
Ahy15g0766 15 10446355 10450275 Ahy17g2409 17 115560730 115564717 ECH