Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0762 ATGAGAGTTCCCGTTTCGTCATCCCAAAACAATAAACCCGTAGAAAGCACAATCGGCCTCGAGCCCACATCGGTGCTCGACCTGTGTAGAAGCCCCACCCCTGAGAAGGCAGTGGCTGCGCTGGTGGCTACTGCACCCAACACACAGCAAGAGTGTCTTGACCAGCTGGAGGACCATGTCCTGCACAATCTTGATTGGGACTCCATCATGAAGGACCTTGGATTCCACGAAGACTCCAACCCACCCTTGTTCAAGACCACCCTCCCTAATGTCCCTGACTTCTCTCCTTCCTTCGACCCACACTCCGAATTCCCAGACATCCAAACCATGTCCTACAACTACGCCAACGCCACTGCCACCCTCGACCACCTCCTCCACGACACCTCCAATAATTCTGCTGCCACCGGCTTCGATTTCATAGAGGAGCTCATCCGTGCTGCCGATTGCTTCGACACCAACCACCTCCACGTGGCTCACGTCATATTGGAGCGACTCAATCAACGCCTCCGATCCCCCGCGGGTGCAAAGCCTCTCCAACGCGCCGCCTTCTACTTCAAGGAAGCTCTCCAGGGCCTCCTCTCCGGTTCCAATCGCACTCCGCGTTTCTCCTCCCTCGTTGAGATCGTCCACTGCGTCAGAACATTCAAGGCCTTCTCTGGAATCTCACCGATCCCTATGTTCTCCATCTTCACCACCAACCAGGCGCTCCTTGAGGCCTTTCATGGCTCCTCCTTCATGCACGTCCTTGATTTTGATATCGGATTAGGGATCCAGTATGCTTCGCTCATGAAGGAGATTGCAGAAAAGGCGGATTCCTTGAAACACGGATCGCCGCTTCTGCGCATCACCGCCGTCGTTCCCGAAGAGTACGCCGTCGAGAGCAAACTGATTCGGGAGAATCTCAGCCAGTTCGCGCACGAGCTCAGGATCCGCGTCCAGGTCGAGTTTGTGCCCCTCTGCAACTTCGAGACGCTGTCCTTTAAGGCGGTGAAGTTCGTCGATGGCGAGAAAACCGCCGTTCTTCTCTCGCCTGCGATATTCCGACGGCTCGGATCCGCTGGGAGCACCGCGGCCTTCCTGGCGGACGTTCGGAGGGTTTCGCCGAGCGTGGTGGTGTTCGTGGACGGGGAGGGGTGGACGGAGGCCGCGGCAGCGGCGTCGTTCCGGCGCGGCGTGGTGAGCAGTCTAGAGTTCTACTCGATGATGCTGGAGTCGCTGGACGCGTCGATGGTTGCGGGAGGGGAGTGGGTGAGGAGGATCGAGATGCTTCTGCTGCGCCCGAAGATACTAGCGGCGGTGGAGGGAGCGGGGCGGAGGGTTCCGCCGTGGAGAGAGGCTTTCTATGGTGCCGGAATGAGGCCGGTGCAGTTAAGCCAGTTCGCGGATTTTCAGGCGGAGTGCTTGCTGGCTAAGGTGCAAATCAGGGGCTTCCACGTGGCAAAACGCCAAGCTGAGCTTGTGCTGTTCTGGCACGAGAGGGCCATGGTTGCCACGTCAGCTTGGCGATGTTAG 1512 0.5827 MRVPVSSSQNNKPVESTIGLEPTSVLDLCRSPTPEKAVAALVATAPNTQQECLDQLEDHVLHNLDWDSIMKDLGFHEDSNPPLFKTTLPNVPDFSPSFDPHSEFPDIQTMSYNYANATATLDHLLHDTSNNSAATGFDFIEELIRAADCFDTNHLHVAHVILERLNQRLRSPAGAKPLQRAAFYFKEALQGLLSGSNRTPRFSSLVEIVHCVRTFKAFSGISPIPMFSIFTTNQALLEAFHGSSFMHVLDFDIGLGIQYASLMKEIAEKADSLKHGSPLLRITAVVPEEYAVESKLIRENLSQFAHELRIRVQVEFVPLCNFETLSFKAVKFVDGEKTAVLLSPAIFRRLGSAGSTAAFLADVRRVSPSVVVFVDGEGWTEAAAAASFRRGVVSSLEFYSMMLESLDASMVAGGEWVRRIEMLLLRPKILAAVEGAGRRVPPWREAFYGAGMRPVQLSQFADFQAECLLAKVQIRGFHVAKRQAELVLFWHERAMVATSAWRC* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0762 503 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 11 502 IPR005202 -
Ahy15g0762 503 PANTHER SCARECROW-LIKE PROTEIN 15 11 502 - -
Ahy15g0762 503 Pfam GRAS domain family 140 502 IPR005202 -
Ahy15g0762 503 ProSiteProfiles GRAS family profile. 130 502 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0762 Ahy-Chr15 10405741 10408128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g0762 56 502 GRAS Transcription Factor Family AT4G36710 54.968 6.71e-164 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ahy15g0762 GRAS 3.80E-85 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0762 - - aip:107640116 955.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g0762 15 10405741 10408128 Ahy15g0762 15 10405741 10408128 ECH