Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0759 ATGGATGAACAAATGATGCTTATATCTCAGCTATATCCTGCTGGTGGTGGTGCCTACACTCAGATAATTGCTCAACAAGGGGAGAATAAGAAAGCAAGAAGGAGGCGTAATAAGAAGAAGAAGGGAGGAGAAAACGGAGGTGGAGAAGGGAACAAAAAGAGAAAGTTGAGTGAAGAGCAAGTGAATCTTCTTGAGATGAATTTTGGGAATGAACACAAACTGGAGTCGGAACGGAAGGACAAGCTAGCTTTGGAGCTTGGTTTGGATCCGAGGCAAGTTGCCGTTTGGTTTCAGAATAGAAGAGCTCGTTGGAAGAACAAGAAACTGGAGGAAGAATACTCCAATCTCAAGAGAGCACATGAAACCACTTTACTCGACAAATGTCGCCTTGAAACTGAGGTGCTGAAACTTAACGAGCAACTTTCTAATGCAAAAGAGGAGATTCAACGATTGCAAGACATGGTCCCAAGCAACAGTTCTAGTTCGCAATCGCAATCACAATCACAGTCAATGGAAATTATGGACCCGCCATTTCTTGGAGACTATGTCTTTTGTGTACCTGAAGCTCATTACATTAATGGCATGGAATGGGTTGATCCGTACGAAAATATTTGGTAA 618 0.4256 MDEQMMLISQLYPAGGGAYTQIIAQQGENKKARRRRNKKKKGGENGGGEGNKKRKLSEEQVNLLEMNFGNEHKLESERKDKLALELGLDPRQVAVWFQNRRARWKNKKLEEEYSNLKRAHETTLLDKCRLETEVLKLNEQLSNAKEEIQRLQDMVPSNSSSSQSQSQSQSMEIMDPPFLGDYVFCVPEAHYINGMEWVDPYENIW* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0759 205 MobiDBLite consensus disorder prediction 42 57 - -
Ahy15g0759 205 PRINTS Lambda-repressor HTH signature 78 87 IPR000047 GO:0003677
Ahy15g0759 205 PRINTS Lambda-repressor HTH signature 87 103 IPR000047 GO:0003677
Ahy15g0759 205 Coils Coil 134 154 - -
Ahy15g0759 205 SMART HOX_1 50 111 IPR001356 GO:0003677
Ahy15g0759 205 MobiDBLite consensus disorder prediction 152 171 - -
Ahy15g0759 205 SUPERFAMILY Homeodomain-like 51 115 IPR009057 -
Ahy15g0759 205 Pfam Homeodomain 52 106 IPR001356 GO:0003677
Ahy15g0759 205 MobiDBLite consensus disorder prediction 23 57 - -
Ahy15g0759 205 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 2 202 IPR045224 GO:0003700
Ahy15g0759 205 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-40-LIKE 2 202 - -
Ahy15g0759 205 Coils Coil 99 126 - -
Ahy15g0759 205 CDD homeodomain 54 108 IPR001356 GO:0003677
Ahy15g0759 205 Gene3D - 43 115 - -
Ahy15g0759 205 ProSiteProfiles 'Homeobox' domain profile. 47 107 IPR001356 GO:0003677
Ahy15g0759 205 ProSitePatterns 'Homeobox' domain signature. 82 105 IPR017970 GO:0000981|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0759 Ahy-Chr15 10386434 10388120 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g0759 2 201 Homeobox Transcription Factor Family AT4G36740 54.884 8.59e-69 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Ahy15g0759 Homeodomain 2.20E-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0759 K09338 - gmx:100809616 256.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g0759 15 10386434 10388120 Ahy15g0759 15 10386434 10388120 ECH