Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0719 ATGGGTTGGTTATCCAAGTTGCTTAAGGGCTCTAACCATAGAACTTCAAGAGGGCAATACCATGGCAAATATGGAGAGGACAGAATTTGGGATAACCATCATGCTTCAGTGGATGATTTGAACGATGTTGAGAAAGAGGACATTGATTGTGCAATTGCACTCTCTCTGTCAGAGCAGGATCAGAAAGGAAAAAGTGTTGTTGTCTATGATATCGCAGAGGACGACTCTCAATCCGAAGAAGATGAACAACTTTGTAAAGTTGATGATGAGGAAGATGAGCATACTTGTACAGTTCAACAACAAGAAGAAGAACATCTTGATAAGGTTCGGCTGGATGAAGATGATGAACATCTTTCTAAAGATCAACTTGAGGAAGATGAGCAACTTGCCAGGGCAATCCAAGAAAGTTTGAAAATTGATTCTCCTCCTAGTCCTAGATATGAGAATGATTCTATTTTCCAACCTTTATCAAACCTCTTTCCACCAGGATACAGAATCTGTGCTGGATGCAAAGCTGAAATTGGGCATGGAAGATTTTTAAGTTGCATGGGAGCTGTTTGGCATCCACAATGTTTTCGCTGCAATGCTTGCAATCTTCCAATAACAGATTATGAGTTTTCCATGTCTAGCAATTGCCCCTACCATAAATCTTGCTACAGGGAGCAACACCACCCAAGATGTGATGTTTGCAATAACTTTATTCCAACTAATTCAGCTGGTCTCATTGAGTATAGAGCTCATCCTTTCTGGCTACAAAAATACTGTCCATCGCATGATCGAGATGGAACTCCTCGGTGTTGTAGCTGCGAAAGAATGGAGCCAAGGGATACAAAGTATCTTTTGCTTGATGATGGTAGAAAGCTATGTTTAGAGTGTCTGGACTCATCAATCATGGATACTCATGAATGCCAACCTCTCTACCTTGAAATACAAGAGTTCTATGAAGGTTTAAACATGAAAGTTGAGCAGCAAGTTCCTATGCTTCTGGTTGAGAGACAAGCACTGAATGAGGCCATGGAGGGAGAAAAGAATGGTCATCACCACTTGCCTGAAACTAGAGGACTGTGTTTGTCAGAAGAGCAAACTGTCACCTCGATTTCAAGGAGACCAAAGATAGGAGCAGGCCATCGAGTCGTGGATATGGTAACAGAGCCTTTTAGGCTGATCCGTCGATGTGAAGTGACAGCCATTCTTGTGTTGTATGGCCTTCCTAGGTTGTTGACAGGATCAATCCTGGCTCATGAGATGATGCATGCATGGCTCAGGCTTAAAGGTTATCCCAATCTGAGTCCAGAGGTTGAAGAAGGAATTTGCCAAGTCTTGGCTCATATGTGGTTAGATTCAGAAATATATTCTGCATCCGGTAGTGATTGTTCATCTTCGTCTTCATCATCGCCTTCCTCCTCCTCCTCTTCCTCCTCCTCCGCATCATCAAAGAAAGGCAAACGGTCTGATTTCGAGAAGAAGCTCGGCGAGTTTTTTAAGCACCAGATTGAGGCTGATACATCATCAGCTTATGGAAAAGGATTCAGGTTGGGAAACGAGGCAGTGCTCAAGTATGGTCTCAGAAGTACCCTTGATCATATCCAAATGACTGGAAGTTTTCCATATTGA 1614 0.4263 MGWLSKLLKGSNHRTSRGQYHGKYGEDRIWDNHHASVDDLNDVEKEDIDCAIALSLSEQDQKGKSVVVYDIAEDDSQSEEDEQLCKVDDEEDEHTCTVQQQEEEHLDKVRLDEDDEHLSKDQLEEDEQLARAIQESLKIDSPPSPRYENDSIFQPLSNLFPPGYRICAGCKAEIGHGRFLSCMGAVWHPQCFRCNACNLPITDYEFSMSSNCPYHKSCYREQHHPRCDVCNNFIPTNSAGLIEYRAHPFWLQKYCPSHDRDGTPRCCSCERMEPRDTKYLLLDDGRKLCLECLDSSIMDTHECQPLYLEIQEFYEGLNMKVEQQVPMLLVERQALNEAMEGEKNGHHHLPETRGLCLSEEQTVTSISRRPKIGAGHRVVDMVTEPFRLIRRCEVTAILVLYGLPRLLTGSILAHEMMHAWLRLKGYPNLSPEVEEGICQVLAHMWLDSEIYSASGSDCSSSSSSSPSSSSSSSSSASSKKGKRSDFEKKLGEFFKHQIEADTSSAYGKGFRLGNEAVLKYGLRSTLDHIQMTGSFPY* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0719 537 SMART uim 43 62 IPR003903 -
Ahy15g0719 537 SMART uim 124 143 IPR003903 -
Ahy15g0719 537 MobiDBLite consensus disorder prediction 461 479 - -
Ahy15g0719 537 SMART lim_4 166 218 IPR001781 -
Ahy15g0719 537 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 124 143 IPR003903 -
Ahy15g0719 537 Pfam LIM domain 167 222 IPR001781 -
Ahy15g0719 537 ProSiteProfiles LIM domain profile. 165 225 IPR001781 -
Ahy15g0719 537 PANTHER TRANSCRIPTION FACTOR INTERACTOR AND REGULATOR LIM FAMILY-RELATED 1 537 - -
Ahy15g0719 537 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 193 248 - -
Ahy15g0719 537 CDD LIM_DA1 167 219 - -
Ahy15g0719 537 Gene3D Cysteine Rich Protein 161 224 - -
Ahy15g0719 537 ProSitePatterns LIM zinc-binding domain signature. 167 201 IPR001781 -
Ahy15g0719 537 MobiDBLite consensus disorder prediction 461 483 - -
Ahy15g0719 537 PANTHER PROTEIN DA1-RELATED 2 1 537 IPR045218 -
Ahy15g0719 537 MobiDBLite consensus disorder prediction 1 22 - -
Ahy15g0719 537 Pfam Protein DA1 316 532 IPR022087 -
Ahy15g0719 537 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 160 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0719 Ahy-Chr15 9645918 9649722 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ahy15g0719 DA1-like 8.00E-106 CL0126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0719 - - aip:107642826 945.266
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g0719 15 9645918 9649722 Ahy15g0719 15 9645918 9649722 ECH