Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0718 ATGTCCCATCAGCAAGATTACCAGCAACAAGCAGCAGGAATCTTCAGCTTCACGAATGGCTTCGAGAGATCGACGGTAACACACCAACAAGCACAGATCCGAAGGGACAACAACAAAGGCTTCGATGCACCGCCACCACCATTAGTAGGGATAGACGAGGAAGAAGAACAAGCAGGAGGAGCTGCAGGAGGAGGCCTTCCCCATGTGTATGAAACCGCAGGCATGCTTTCGGAGATGTTCAATTTCCCTGCCACCGAGCTCCTGGAACAGCAGCACCACCACTTCCGCTCCCCTTCTTCGTCGAGGCCACAACCACCAGAGAACTGGTACGGAAGCAGGCAAGGCATGATAGCCACCACCACGACGGGGTTTGGAGGAGACTCCAAGCAGCAGATTTCAAGCATTAATGCGGATTCAGCAGCAGCCATGCACCTTTTCCTGATGAACCCAGCTCAAAGGAGATCTCCTTCGCCTCCTCCATCGGCAACCTCTTCCACTCTCCACATGCTTCTTCCCAACCATTCCTCCAACTCCTTACAAGGGTTCCCTCCTGCTGGCTCCGCAGGAGGGTCTTTCGGGCAATTCACATGGGTTCCCGACAGCGGCGCCGGCCATGAGGGAGCAGCTAACAACCCTGCTGCTGCTCCTCCTGGCCATCACGAGATTAACGTGGTGGAAGGGCAAGGCCTTTCGCTCTCGCTTTCGTCTTCGCTTCAGCACTTGGAAGCTGCGAAAGCGGAGGAACTGAGGATGGGAGAAGGCGGTTTTCTATTTTACAATCAAGGGGGAGGAGCGGCGGCTTCTAATTCGGGTCATTTTCCGTACAAGAACCATTTGCAAGGTGGCATGGTAGGACAGGGGCACCTTGCTGGGTTCGCTTCTGCTTCATCTTCTTCGTCCTTAGGGGTAGTTCACGTTCTTAGGAATTCAAAGTATGTGAAAGCCGCACAAGAGTTGCTTGAGGAGTTTTGCAGTGTTGGAAGGGGCCACTTCAAGAAAAACAAGTTCAGTAGGCAGAATTCAAACCCTAATTCCACCGCCTCTCCTTCATCTTCCAAAGATCCTCCTCCTGCTGCAGCTCCACCTCCGCCTCCTTTGTCAGCTTCCGACAGGATTGAGCATCAGAGAAGGAAGGTCAAACTTCTATCAATGCTTGACGAGGTGGACCGAAGATACAACCACTACTGCGAGCAAATGCAGATGGTGGTGAACTCATTTGACGTGGTGATGGGGTACGGGGCGGCGGTGCCGTACACGGCGCTGGCGCAGAAGGCGATGTCGAGGCATTTCCGGTGCCTGAAGGACGCAATAACGACGCAGCTGAAGCATTCGTGCGAGGTGCTGGGGGAGAAGGAGGGGGCGGGAGGGTCAGGGCTGACGAAGGGGGAGACGCCGCGGCTGAAGATGTTGGAGCAGAGCCTACGGCAGCAGAGGGCGTTCCAGCAGATGGGTATGATGGAACAAGAAGCTTGGAGACCTCAGAGAGGCTTGCCTGAACGTTCTGTCAACATTTTGAGAGCTTGGCTTTTTGAGCATTTTCTCCACCCGTATCCAAGCGATGCAGATAAGCATCTCTTGGCGAGGCAGACTGGCCTCTCCAGAAATCAGGTATCAAACTGGTTCATAAATGCCAGGGTTCGGTTGTGGAAACCCATGGTGGAAGAGATGTACCAACAAGAACAAAAAGAAGCAGAGGAGTGTGGGGCAGCGGAAGAAGGCGAAGAAGAGGAAGAAGAAGAACAAAACAACAGCAGCAACGGTGGGCAGCAACAAGCACAAAATCCAAGCACAACGAGTGGCGGTGAAAGCGAAATACAAGTAGAAGGGTTTTCGGAAAACCAAGAGGGCGGCAGCAATAGCATAATGGTTGCGCAAGGTGGAATGGCGTCGGAGATGATGCCCCCACAACAGTCACAGAGATCGATGGCAAGCGATGACACGTGTCGACATGGCAGCTACGTAGCAGGTGCTGAATATGGGACCGCGTCTACTACTGCTGCTGCTGCCGCTGCTGACATTGGATCCGCTACCCTCATTAGGTTCGGGACCACCGCCGGTGACGTGTCACTCACCCTAGGGTTACGCCACGCCGGGAACGTCCCCCGACAAAACCCCTTTTTCTCTTAG 2127 0.5402 MSHQQDYQQQAAGIFSFTNGFERSTVTHQQAQIRRDNNKGFDAPPPPLVGIDEEEEQAGGAAGGGLPHVYETAGMLSEMFNFPATELLEQQHHHFRSPSSSRPQPPENWYGSRQGMIATTTTGFGGDSKQQISSINADSAAAMHLFLMNPAQRRSPSPPPSATSSTLHMLLPNHSSNSLQGFPPAGSAGGSFGQFTWVPDSGAGHEGAANNPAAAPPGHHEINVVEGQGLSLSLSSSLQHLEAAKAEELRMGEGGFLFYNQGGGAAASNSGHFPYKNHLQGGMVGQGHLAGFASASSSSSLGVVHVLRNSKYVKAAQELLEEFCSVGRGHFKKNKFSRQNSNPNSTASPSSSKDPPPAAAPPPPPLSASDRIEHQRRKVKLLSMLDEVDRRYNHYCEQMQMVVNSFDVVMGYGAAVPYTALAQKAMSRHFRCLKDAITTQLKHSCEVLGEKEGAGGSGLTKGETPRLKMLEQSLRQQRAFQQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEEMYQQEQKEAEECGAAEEGEEEEEEEQNNSSNGGQQQAQNPSTTSGGESEIQVEGFSENQEGGSNSIMVAQGGMASEMMPPQQSQRSMASDDTCRHGSYVAGAEYGTASTTAAAAAADIGSATLIRFGTTAGDVSLTLGLRHAGNVPRQNPFFS* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0718 708 MobiDBLite consensus disorder prediction 354 368 - -
Ahy15g0718 708 SUPERFAMILY Homeodomain-like 492 558 IPR009057 -
Ahy15g0718 708 MobiDBLite consensus disorder prediction 334 373 - -
Ahy15g0718 708 Pfam Associated with HOX 306 438 IPR006563 -
Ahy15g0718 708 MobiDBLite consensus disorder prediction 336 353 - -
Ahy15g0718 708 MobiDBLite consensus disorder prediction 567 582 - -
Ahy15g0718 708 ProSiteProfiles 'Homeobox' domain profile. 488 551 IPR001356 GO:0003677
Ahy15g0718 708 MobiDBLite consensus disorder prediction 583 620 - -
Ahy15g0718 708 MobiDBLite consensus disorder prediction 158 184 - -
Ahy15g0718 708 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 2 50 701 - -
Ahy15g0718 708 SMART prehox3 301 439 IPR006563 -
Ahy15g0718 708 MobiDBLite consensus disorder prediction 559 620 - -
Ahy15g0718 708 CDD homeodomain 491 552 IPR001356 GO:0003677
Ahy15g0718 708 SMART HOX_1 491 555 IPR001356 GO:0003677
Ahy15g0718 708 MobiDBLite consensus disorder prediction 151 220 - -
Ahy15g0718 708 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 50 701 - -
Ahy15g0718 708 Gene3D - 494 556 - -
Ahy15g0718 708 Pfam Homeobox KN domain 508 547 IPR008422 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0718 Ahy-Chr15 9611708 9619194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g0718 2 94 Homeobox Transcription Factor Family AT2G23760 36.111 1.55e-07 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Ahy15g0718 POX 3.20E-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0718 - - adu:107487904 1085.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g0718 15 9611708 9619194 Ahy15g0718 15 9611708 9619194 ECH