Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0698 ATGTCCATAAAGGAGGATGATGTAAAGAATGATTCTGATAATGATTTGGGTGATGATTTCGATTATCAACCGAATGCAGAAGATGATGCTGATGACGACGATGTGGATTCGCTGGATTCCACTAGCAAGAGTGAAGAAGTTTGTGGTGTAAAAAGAATAGCGGATTTAATGGTGGAGGATATTTGGAACCTGGAGTTTAGGACGGAGGATGAGGCTTGCCAATTTTATAACGCTTATTCTTGTTGGCATGGATTTGTAATGAGGAAGGACGACGTGGTTAAGGATAATCAAGGTAGAATCATTAGCAGGCAACTTGTTTGCAACAAAGAGGGCTGGAGAAATATGAGGTATCTTGATATGGATGATAGATCAAGGGAGTCAAGGTCACTAACGCGAACCAAGTGTCCAGCTCGGCTTAGGGTAAAGCTTGACTACAGCTGCGGTAGATGGAAGGTATCATGTTTTGTGGAATCTCACAACCACGATCTGACGCCACCCCAATTTGCGCATCTGGTACCGGCCAATCGTCGTCTAACTGTCACTGATAGAGTCCAAGTGGAAAATCTTCATAATTTTGGTGTCAAGAGCTGCCATATTATGGGGTATATTGCATTCCAGAAGGGTGGATATCGTCATGCTGGCTTCACACGGAAAGATTTGTACAACCACATCGATCGCTATCATCGGGCAAAAGTTAAAAACGGGGATGCCAATGCGGCAATAAACTATTTGATTGGCAAGTCAAACAACGATCCGATGTTCTTTGGAAAGTATACGTTCACTAGTGACGAAAGGCTGGAGCATATTTTTTTGGCAGATGGGCAGTCAATTATCAAATATCTTTGCTTTGGAGATATTGTTGCCTTTGATTCAACCTACAAGAAGAATAAATACAACAAGCCTTTGGTCATTTTCTCTGGATGCAATCATCACGGGCAGACTGTTATCTTCGGCCCCGGCCTACTATCCGACGAAACCACAGAGACGTATAAGTGGTTGTTGGAAACCTTTGTTGAAGCGATGGGTGGGAAAAGTCCAAAAGCAGTAATAACTGACGGAGACCTTGCCATGCGAGATGCAATCAAGAATGGTCTTATATACGACAACAACGACCAGAGAGACTTTGATCGGAGATGGGCGGCCATTTTGGATAAGCACAAGCTTGTTGGCAGTACCTGGATGGAAAAGACGTACGAAACTCGTGAGATGTGGTCCCATTGTTTCCTCCGAGATAAGTTTTTCGGTTACATAAGGACAACATCACAGTGTGAAGGTACAAATTCTCTCATCAGATTTTATGTTAATCGCAAGAACACCCTCATTGACTTCATGCATAACCTGGATAGGGCCTTAAAGGAGTATAAAAACAACGAATTAATAGCTGACTTTAAGTCTCAGTGCTCAGAGCCAGTGATGATTACCTCGTTGGAGGTATATGAAAGATATGCATCATGTTATTTCACGCAAAACATTTTCAAGAAAATTCGTAATGAGATTCAGAGGGCAGGGGCTTTGAATATAACGGTACTAAGCACAACCTTGGACAAGGTAGAGTTCAGTGTGACTGCTCTCGGAGACCCGGCCAAAGATCGACGGATGGAAGTTGATAGAGGTAAGAATCTGTTCTCGTGCTCGTGCAAGCTGTTTGAATCACGTGGTATTCTCTGTAGTCATATCTTCTGTGCCATGAAGTTCGAAAACATACTTGAGTTTCCAGATTCGTTGATATACAAAAGGTGGACAAAGAATGCAAAGAACGAATTTATTAGCACAGAAATGCCTGTGAATGATGACATCGAAAGGGTCTTAAAGTTTCGAGTTGGAGCATTGGCATCGAATTGCAACAAGCTGTGTGATATTGCTTGCAAGGATCTTGCAGACTTTGATGAAGTCCAGTCTGAACTTGTCAATTTAGTTATCCGCCTGCAGTCCCGCAAACAAGGCAAGTCAACTCCTAATGTTAACGTGGAAGGCATCAACGATCCCTTTGTTGTCAAAAGTAAAGGAGCCCCTTCCAAGAGGTCTTCTTGGAGGAAGAAGAGAGCATGCTCTAATTGCCACAAGTACGGTCATTACTACAAGCACTGTCCAGATCTGATGCAGCATAGTGTGGATGGTAACCCTCGCGATCAATCATATGGCAATGCATCGGCCAAGGACTCAGGTTTTAGTCCAGAAAGGTTTGCTAATTCTTCGAGGTCGTTCTCAATTAAGTCCGAACACCACTCAGGACCTAATACCAAGGGTGGAACAAGGAAGTTTACGGCGACGGGTATGAGGAACCGGAAGGGTAAAGACAACACTTTTGTTGAGGTGAAGGAGTCACAGCAGGACAAGAGACATTCATTCACGAACTATGAATGCGTTAATGATGTCATTGATGATAAATGTGACACGCGACATGTGCAGATCGATGTCCGAGATCCGTTACCATCGTCACTGCCTTGTGGCAACAAACAAGGATCGTACATGGCATTGTTCGCGTCGATGCATAGGACACTTTGA 2505 0.4347 MSIKEDDVKNDSDNDLGDDFDYQPNAEDDADDDDVDSLDSTSKSEEVCGVKRIADLMVEDIWNLEFRTEDEACQFYNAYSCWHGFVMRKDDVVKDNQGRIISRQLVCNKEGWRNMRYLDMDDRSRESRSLTRTKCPARLRVKLDYSCGRWKVSCFVESHNHDLTPPQFAHLVPANRRLTVTDRVQVENLHNFGVKSCHIMGYIAFQKGGYRHAGFTRKDLYNHIDRYHRAKVKNGDANAAINYLIGKSNNDPMFFGKYTFTSDERLEHIFLADGQSIIKYLCFGDIVAFDSTYKKNKYNKPLVIFSGCNHHGQTVIFGPGLLSDETTETYKWLLETFVEAMGGKSPKAVITDGDLAMRDAIKNGLIYDNNDQRDFDRRWAAILDKHKLVGSTWMEKTYETREMWSHCFLRDKFFGYIRTTSQCEGTNSLIRFYVNRKNTLIDFMHNLDRALKEYKNNELIADFKSQCSEPVMITSLEVYERYASCYFTQNIFKKIRNEIQRAGALNITVLSTTLDKVEFSVTALGDPAKDRRMEVDRGKNLFSCSCKLFESRGILCSHIFCAMKFENILEFPDSLIYKRWTKNAKNEFISTEMPVNDDIERVLKFRVGALASNCNKLCDIACKDLADFDEVQSELVNLVIRLQSRKQGKSTPNVNVEGINDPFVVKSKGAPSKRSSWRKKRACSNCHKYGHYYKHCPDLMQHSVDGNPRDQSYGNASAKDSGFSPERFANSSRSFSIKSEHHSGPNTKGGTRKFTATGMRNRKGKDNTFVEVKESQQDKRHSFTNYECVNDVIDDKCDTRHVQIDVRDPLPSSLPCGNKQGSYMALFASMHRTL* 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0698 834 MobiDBLite consensus disorder prediction 705 754 - -
Ahy15g0698 834 Pfam MULE transposase domain 286 363 IPR018289 -
Ahy15g0698 834 ProSiteProfiles Zinc finger CCHC-type profile. 683 698 IPR001878 GO:0003676|GO:0008270
Ahy15g0698 834 ProSiteProfiles Zinc finger SWIM-type profile. 529 567 IPR007527 GO:0008270
Ahy15g0698 834 MobiDBLite consensus disorder prediction 12 39 - -
Ahy15g0698 834 SUPERFAMILY Retrovirus zinc finger-like domains 669 701 IPR036875 GO:0003676|GO:0008270
Ahy15g0698 834 MobiDBLite consensus disorder prediction 1 42 - -
Ahy15g0698 834 SMART 26again6 542 569 IPR006564 GO:0008270
Ahy15g0698 834 MobiDBLite consensus disorder prediction 703 759 - -
Ahy15g0698 834 PANTHER OS03G0181600 PROTEIN 57 362 - -
Ahy15g0698 834 PANTHER OS03G0181600 PROTEIN 366 636 - -
Ahy15g0698 834 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 57 362 IPR031052 GO:0006355
Ahy15g0698 834 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 366 636 IPR031052 GO:0006355
Ahy15g0698 834 Pfam FAR1 DNA-binding domain 74 164 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0698 Ahy-Chr15 9329254 9332255 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy15g0698 FAR1 2.00E-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0698 - - ahf:112755379 1592.02