Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0676 ATGTCGTCGTCGAATTCACCTTGCGCAGCGTGCAAGTTCTTGCGGAGGAAGTGCACGCAGGAGTGCGTTTTCGCGCCGTATTTCCCGCCGGACAACCCGCAGAGGTTCGCATACGTGCACAAGGTTTTCGGCGCCAGCAACGTCGCCAAGCTGCTGAACGAACTCAACGCCGCGCAGAGAGACGACGCCGTGAAGTCGTTGGCGTACGAGGCTGAGGCGCGTTTAAGAGACCCCGTCTACGGTTGCGTGGGTCTCATATCGGTGCTGCAGCACCGGCTCCGGCAGATCCAGGTGGAGCTCACCAACGCCAAGAAGGAGCTCGCCACCTACATTGGCCCTCAGGCACTGCAGGGTGTCCCAACCACCGCCATTCTCCAGCATCACCATTCCTTTGCCTCGCAGATGTTCCCTTACAACAGCGCCATGGCTGCTCCGCCAGCTATTGCTCATGGCGGACAGTTGATGATTCGCGACGCTCAGACTGCCCCTCCGACTCCGCAACAGCAGATCTTGGAGGCTCAGCAGCTGGCTGCTGCGGTGGTGGTGAGGGATCAACAAGATATGTTCAGAGGGTATGATCAGCATCATCAACAGCAAGAGTTTCTGAGGTTTAATGGTGGAGGGTTTGATATGGGTTCGGTTTCTTCCGGTGGTGGTGGGTACAGCCAGGTTAGTGGCGGTGGAAGTGGTGGCGGTTCTGGTGATCAGTTGTCTCCTTCGTTGGCTTTGGGGTCTTTTGACAATCCATACCATATGCAGCAAGGGGAAAGCCATGCTCACCATCTTCCTCTTCAGGCGCAGCTACTTCTCCCACCGCAGCAGAAGCAGGCTCAACAGCAAGCACAGTCACAGCATATTCCCGGCCACCACCACCAGCAACCTTCGGAAAGCGAGGAGTGTAGGAGTGTCGGTCCATCTTGTTGA 924 0.5714 MSSSNSPCAACKFLRRKCTQECVFAPYFPPDNPQRFAYVHKVFGASNVAKLLNELNAAQRDDAVKSLAYEAEARLRDPVYGCVGLISVLQHRLRQIQVELTNAKKELATYIGPQALQGVPTTAILQHHHSFASQMFPYNSAMAAPPAIAHGGQLMIRDAQTAPPTPQQQILEAQQLAAAVVVRDQQDMFRGYDQHHQQQEFLRFNGGGFDMGSVSSGGGGYSQVSGGGSGGGSGDQLSPSLALGSFDNPYHMQQGESHAHHLPLQAQLLLPPQQKQAQQQAQSQHIPGHHHQQPSESEECRSVGPSC* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0676 307 MobiDBLite consensus disorder prediction 272 290 - -
Ahy15g0676 307 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Ahy15g0676 307 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 285 - -
Ahy15g0676 307 MobiDBLite consensus disorder prediction 214 260 - -
Ahy15g0676 307 MobiDBLite consensus disorder prediction 272 307 - -
Ahy15g0676 307 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Ahy15g0676 307 Coils Coil 86 106 - -
Ahy15g0676 307 PANTHER LOB DOMAIN-CONTAINING PROTEIN 36-LIKE 1 285 - -
Ahy15g0676 307 MobiDBLite consensus disorder prediction 216 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0676 Ahy-Chr15 9060183 9062110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g0676 1 230 AS2 family AT5G66870 55.785 3.29e-74 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy15g0676 LOB 1.70E-41 No_clan