LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy15g0673	ATGCGGTGGTTACCATCGAATATATTCACCCCTCCTCATCCTCATTCCTCCTCTTCTTCTACTTCACATTCTCCTTCTTCTTCGCTTTCATCTTCGCCGTCCAATGCTCCGCCACCTGCTTTGTCAGCATTTCCATCCAGTGGCCGAACGCTGCAGACATCCACGTCCACTTCGTCCCTAACGGACCTTCTCCACCCGAGGAAGAAACCTTCCCAGGACTGGACCCGCCGCGCCTGGATCTTCGGATGCGGGATAAGGTCCTCACAAGATGATGACCTGGACGACGACGACTCCGACGCCGTTGTTCCCATGGCTCGTTCCAAAAGCATCAACGACCGCTCCTATACACGATCCCAAACCTCATCTTCCACTTCCTCCGCGATTACTGTTGCTCCTCAGCCCTTGCCCTTGCCGGAGGGGCTCTCCTTCCACCGCGGATACCGCCATAGCTCCGTTGAACGACGTTCGCCATCTCCAAAGCGCCACGCCACCGGGAACAACTTTTTCTCCTCCTCCTACAAAGGCCTTGACGAACGCGAACTTCGAGTCGATGCCCTAATCATCGATTCTGTCCCCGTCTCCAATCCCTATCCTCCCATGCGAAGTGTATTTGCGAGCACAAGAAACAGCAATGATTCGATGGAAAGAAGAGTGCCAGGTGTAGGACCACAAGAAAACGGTGGTTATGGAGGAGGAGATAACAACCAGAGGATGAGCGTGTCATCGTCAAAGAGTGCTCCCGGTAGCCTCTTTGAAAGCCCAACATTAAGTCCACAGAACATGAGAAACGATGACTTTGTTCCGTACCATTACACGCCACCAAAACATAACCATTTCTGGTCTGCACCTGAGATCATAGGAGGAGGAGGAGGAGGATTCTTTGATTTGTCTCCAAAGGGGATGGATGCTAACAGCAATAATTCTCCCCACCACAGTCCAAAGGGAACCTTGACCCCACGCCATGGCAACTCCAAAAGCCCAACAAGACCTTCTTCCCCCATACAGACCTTGTCCATTGACAACTTCAAACCTCAAGCTAGCTTTCGCCGCGATGTTATTATTGGCCCTATCAACAATGTTCATCCCTTACCCTTGCCTCCTCCCACGGCCTTGACTTCACCAACTGCTACTCATGCACAGTCCCAAGCTAGCAGAAATGAATCCTGTTCAATGCAGAGCCAATGGCAAAAGGGAAAACTCATTGGTCGAGGTACCTTTGGAAGCGTCTATGTCGCTACCAATAGAGAAACTGGAGCATTGTGCGCAATGAAAGAAGTAGAAATATTTGCTGATGATCCAAAATCTAAAGAGTGTATAAAACAGTTAGAGCAGGAGATTAAAATTCTTAGTAACCTGAAGCATCCAAACATTGTGCAATATTATGGTAGTGAAATAGTTGGAGACAAGTTTTACATTTATCTGGAATATGTCTATCCAGGTTCAATAAACAAATACGTCCGGGAACATTGTGGTGCAGTAACGGAATCCGTTGTTAGGAATTTCACTCGCCATATTCTTTCAGGGCTAGCTTACTTGCATAGCACGAAAACAATTCATAGGGACATCAAAGGGGCTAACTTGTTAGTTGATTCTACCGGAGTTGTCAAGCTCGCTGACTTTGGGATGTCTAAACATCTAACTGGGCATGCTGCTGATCTTTCTTTGAAGGGAAGCCCATACTGGATGGCGCCAGAGCTTATGCATGCAGTTATGCAAAGAGATAACAACTCTGATCTAGCTTTAGCTGTTGACATTTGGAGTTTGGGTTGCACAATTATTGAAATGTTCACAGGGAAGCCTCCTTGGAGCGAATACGAAGGAGCGGCAGCTATGTTTAAGGTTTTGAGGGATATACCTCCTATACCTGAACAATTGTCATCAGAGGGAAAAGATTTCCTAAGACGTTGCTTCAGAAGAAATCCAGCAGAAAGACCAAATGCATTAATGTTGTTAGATCATCGATTTGTGAAGCACTTCTAA	1980	0.4737	MRWLPSNIFTPPHPHSSSSSTSHSPSSSLSSSPSNAPPPALSAFPSSGRTLQTSTSTSSLTDLLHPRKKPSQDWTRRAWIFGCGIRSSQDDDLDDDDSDAVVPMARSKSINDRSYTRSQTSSSTSSAITVAPQPLPLPEGLSFHRGYRHSSVERRSPSPKRHATGNNFFSSSYKGLDERELRVDALIIDSVPVSNPYPPMRSVFASTRNSNDSMERRVPGVGPQENGGYGGGDNNQRMSVSSSKSAPGSLFESPTLSPQNMRNDDFVPYHYTPPKHNHFWSAPEIIGGGGGGFFDLSPKGMDANSNNSPHHSPKGTLTPRHGNSKSPTRPSSPIQTLSIDNFKPQASFRRDVIIGPINNVHPLPLPPPTALTSPTATHAQSQASRNESCSMQSQWQKGKLIGRGTFGSVYVATNRETGALCAMKEVEIFADDPKSKECIKQLEQEIKILSNLKHPNIVQYYGSEIVGDKFYIYLEYVYPGSINKYVREHCGAVTESVVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVDSTGVVKLADFGMSKHLTGHAADLSLKGSPYWMAPELMHAVMQRDNNSDLALAVDIWSLGCTIIEMFTGKPPWSEYEGAAAMFKVLRDIPPIPEQLSSEGKDFLRRCFRRNPAERPNALMLLDHRFVKHF*	660

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy15g0673	659	MobiDBLite	consensus disorder prediction	104	137	-	-
	Ahy15g0673	659	MobiDBLite	consensus disorder prediction	300	340	-	-
	Ahy15g0673	659	SMART	serkin_6	395	656	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy15g0673	659	Gene3D	Transferase(Phosphotransferase) domain 1	391	659	-	-
	Ahy15g0673	659	MobiDBLite	consensus disorder prediction	10	37	-	-
	Ahy15g0673	659	MobiDBLite	consensus disorder prediction	372	389	-	-
	Ahy15g0673	659	MobiDBLite	consensus disorder prediction	109	131	-	-
	Ahy15g0673	659	MobiDBLite	consensus disorder prediction	1	68	-	-
	Ahy15g0673	659	MobiDBLite	consensus disorder prediction	45	65	-	-
	Ahy15g0673	659	PANTHER	MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5	1	658	-	-
	Ahy15g0673	659	MobiDBLite	consensus disorder prediction	208	261	-	-
	Ahy15g0673	659	PANTHER	MAP KINASE KINASE KINASE SSK2-RELATED-RELATED	1	658	-	-
	Ahy15g0673	659	ProSitePatterns	Protein kinases ATP-binding region signature.	401	424	IPR017441	GO:0005524
	Ahy15g0673	659	MobiDBLite	consensus disorder prediction	291	340	-	-
	Ahy15g0673	659	MobiDBLite	consensus disorder prediction	367	389	-	-
	Ahy15g0673	659	ProSiteProfiles	Protein kinase domain profile.	395	656	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy15g0673	659	SUPERFAMILY	Protein kinase-like (PK-like)	383	657	IPR011009	-
	Ahy15g0673	659	MobiDBLite	consensus disorder prediction	229	261	-	-
	Ahy15g0673	659	Pfam	Protein kinase domain	396	656	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy15g0673	Ahy-Chr15	9021284	9024582	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy15g0673	170	658	MAP Kinase Kinase Kinase	AT5G66850	57.670	0.0	537

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	STE_STE11	Ahy15g0673		Pkinase	1.50E-66	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy15g0673	-		-	cam:101502514	631.328