Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0636 ATGGGAGATCATATGTACAACTATGACAAGAATCTGTCATCGTCCTCTTCTTCACAGGACGAAATCTCTCTTTTCCTGCGTCAGATTCTGCTGCGTTCCTCACAACCTCACCAAGATTCACCACCACCGCCACAACAACAACAACAACTCCCTTCTTCTTCTTCCTCTTCTTGTTTCCCATCAACCTCACAGCTTCAAGATGGGAAGATCTCAGCTCTTGGTTCCACCCGTGCTGGTTTTCTCTCTGCCTCCTCCATGAAGGGGCACGGAGGTAATTCTGCACCAAATGTCTCTTCTTCTTCCGTAGGACTCAGTGCGAACGATACTGATGACTATGATTGCGAAAGTGAGGAGGGTGTTGAGGCCTTGGCAGAAGATGTTCCAGCAAAGCCTGTACCTTCTAGGAGTTCATCAAAGAGGAGCAGAGCAGCAGAAGTTCATAATTTGTCAGAAAAGAGAAGGAGGAGTAGGATCAATGAAAAGATGAAGGCCTTGCAAAATCTAATTCCAAATTCTAACAAGACTGATAAGGCTTCAATGCTGGATGAGGCTATTGAATATCTTAAACAGCTTCAGCTCCAAGTACAGGGGAAGTTTATGATAATATTTCAGATGCTATCGATGAGAAATGGATTGAGTTTGCACCCTATGAGCTTTCCCGAAGGATTGCAGCCTCTACAGTTCTCAAGAATGAGTATGGAGTTTAGTGAAGAAAACAGGGCCATCCCTGTAAACATGACAGAAAGTCTGCCTCTGCACCAAGGCAACCCCTTGCCCTACGCATCCCTACCTAACAAACCAACCATGCCAAATCAGCCATCAGTGACTTACCCTTCATATCTTAACAACTCAGAAGCGCCTTTTGGGCTGGAACCGCCAATCCTAGCACATATAAAACACCTTCAACCAGGAAGATTTTCTGAGGCGCATAGGGAAGACACACTGCAGCAGCAGCAATCAAATGCAAGCCATTCAGATACCGATCCATTAGGTGGTTCTCAAGCTGTAAAAGAGTTGGAGACAGGAACCATGCCCACAACATCACTCTCCTTTGACCTGCAAACATGTGAACCTAAGGACAACAACCCTTTGCAAATTTGCATTGCTGGAAGAGATCAATCATCATCAGTGATCATTAGAAATAGTTAA 1149 0.4491 MGDHMYNYDKNLSSSSSSQDEISLFLRQILLRSSQPHQDSPPPPQQQQQLPSSSSSSCFPSTSQLQDGKISALGSTRAGFLSASSMKGHGGNSAPNVSSSSVGLSANDTDDYDCESEEGVEALAEDVPAKPVPSRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQGKFMIIFQMLSMRNGLSLHPMSFPEGLQPLQFSRMSMEFSEENRAIPVNMTESLPLHQGNPLPYASLPNKPTMPNQPSVTYPSYLNNSEAPFGLEPPILAHIKHLQPGRFSEAHREDTLQQQQSNASHSDTDPLGGSQAVKELETGTMPTTSLSFDLQTCEPKDNNPLQICIAGRDQSSSVIIRNS* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0636 382 Gene3D - 137 199 IPR036638 GO:0046983
Ahy15g0636 382 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 142 191 IPR011598 GO:0046983
Ahy15g0636 382 MobiDBLite consensus disorder prediction 140 156 - -
Ahy15g0636 382 PANTHER TRANSCRIPTION FACTOR SPATULA 13 326 - -
Ahy15g0636 382 CDD bHLH_AtPIF_like 143 212 - -
Ahy15g0636 382 SMART finulus 148 197 IPR011598 GO:0046983
Ahy15g0636 382 MobiDBLite consensus disorder prediction 86 107 - -
Ahy15g0636 382 MobiDBLite consensus disorder prediction 29 69 - -
Ahy15g0636 382 MobiDBLite consensus disorder prediction 313 330 - -
Ahy15g0636 382 MobiDBLite consensus disorder prediction 49 69 - -
Ahy15g0636 382 Pfam Helix-loop-helix DNA-binding domain 146 192 IPR011598 GO:0046983
Ahy15g0636 382 MobiDBLite consensus disorder prediction 86 156 - -
Ahy15g0636 382 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 13 326 IPR031066 -
Ahy15g0636 382 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 139 204 IPR036638 GO:0046983
Ahy15g0636 382 MobiDBLite consensus disorder prediction 306 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0636 Ahy-Chr15 8413618 8417118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g0636 17 336 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 41.899 7.00e-47 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy15g0636 HLH 4.40E-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0636 - - gmx:100793754 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g0636 15 8413618 8417118 Ahy15g0636 15 8413618 8417118 ECH