Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0634 ATGAGGGTTTTCACTACTCCTTCATCAACTTCTGGTACTGGTGGTCATAATAATTCGACACTGTTTTTTGAAAGTTTTTCTTCCTCAGCTATTGTCCCTAGGGAAAACAGAGAGACTTCTATCATGCTCCCAATTAACAATAATAATCCTGCTGTTGAAATAATCCACATCAATGATGAAGAACCAGATCTTGAATCATCATTGTTAGAGGTCAATCTTAATTCTTCCTCTTCAATTTTACCAACAACCGAACAAACCAATCAACATGCCTCAAATCTTTTAACATTACAAAGAAATTTGAGAATCAACACCGCCAACAACAACAACCAACAAGATGGTGTGTCACTTGATTTATCCTTACACCAGTTTGGCGGTGATGGCGGTGGCAGCTCTTCTACTATGGATGTCATCGGTGGCAGCGCTGGTGGTGGTGGTGGAGGTGGAGATGGTCTCTTGATGAGCGTTCTCAACAATACTTCTACTAGGCGCATCATGCCGATCAAAAGAACTGCCCCTGATTATGCTCGCCGAGAGTTTACGGTGGGTGAGAGCTCAAGTGCCGGTGGTGCTGGTGGTGGATCTGTTGCTCAACCTATGGCAGCCCCCAAGCGGCGACCCACCGCAAATGAAAATGCGGCGCTGCGCATTTCATCATCATCTAATACCTGCACTTGTACCCCTTCTCCCACTTGCGCTCTCCATGCTTCCGCCAATAGTAATCTTTCTTCATCTTCCAGGGAACAACCCCATGAAACTGCTAACAACAACAACAACAACCCCCAAAATGTTGTTCGTATTCCTTCTAGTTTGTGGCCAATTTCTGATGTGCAAAGAGCTCTTCAGTCTGATAGCTTTCAAGTCCTTCAACCTACTACTACTGCTGCTACTCCTCCTCCTCCTCCTCCTAGTAGTAGTAATAATAACAATAATAACACAACACTTGGTATTCTGCAACTTGATGATGGTTCCTTTATTTACCCCCAACCTGTTTTTGATAGTAGCCACCACCACCACCAAATCCACCATGGCCACCAGCACACGCCATTTAATCCGTTATACCACCGTGGCTATCAACCATTTTTCTCCACTGCTGACACTTCTCCATTCCGCCCAGCCTCAATCAATTACATGGAGAATCTTCCTCATCATCATCATCATCATCATCCGTACGGCGGTTCTTCTTCTTCTTCTTCGACTCCTTCCCCTCTTCCTTGGAGCACCGTGATTAGGCCAAGGGCTATTCCTGTGTCTCTCACTCACCGAGTTGGAGGAAGTAATAGAGAATCTAACAACACCAGAAACAACTATCCTTTTTCTTCTCCTGCTGGAAGGGGAACAATCACTGTGACTCAGAATCGTGGAAACTCATCATCATCAAGCTTATTCCCCGGTGGGTCTCCTTCAACACGGCTACTCGAAAGCCTTGTACAAAACGCCGGTACCCCTTCTTCTGGATCTGGCGCTGGTCAGAATAATACAGCAGGTACTACCGTTGGAGCTGTTCCTGCAGTTCAGCAGCTGTCGAACGTTGCTCGTGCATGGATTCGAAGGCTGAACGCTCATGACGAGGCCTTGACGAGAACGTCACAATCTTCTACCCGTGATAATACTCCTCACAGGGCACTGCGAGCTTCTCCTATTGCTGAGATCTATAATTTGCCTACTTATTTTGCTGATGATTCAAGAAGGCTTAGACAAGAGATCCGCACTGCCATTGATCATTTGCGTAATGGAGGTTCCGTCCGACTGGAGGAACTTTTAATTCTTGATTACTCCATTGTGCTGAACTTGCTTGACAACATTGAGGAGGAGGAGGATGATGCGGATATGCCGCAGCAGTTTTATGAGTATCTGGGAGACGGGCAGCGAGTGACCAACCCCGATTTAGGACTGACGGAAACTGAGGTTGCAGTATGTATTGGACGGGAAATTTTCCGAACTGTTGGTGGGCAGCCTCAGAACATTGATGCATGCGGCATATGTCAGGAGGACTATGTTCACGGTGAAGAGCTTGGGAGATTGGATTGTGCGCACAGATATCACCTATCTTGCATCAGGCAGTGGTTGCTCATCAAGAACAGATGCCCAATCTGCAAGAAAATGGCTCTCACCATCATAGACTTGGAGGACGACGAGGACGATGATGAGTGA 2151 0.4644 MRVFTTPSSTSGTGGHNNSTLFFESFSSSAIVPRENRETSIMLPINNNNPAVEIIHINDEEPDLESSLLEVNLNSSSSILPTTEQTNQHASNLLTLQRNLRINTANNNNQQDGVSLDLSLHQFGGDGGGSSSTMDVIGGSAGGGGGGGDGLLMSVLNNTSTRRIMPIKRTAPDYARREFTVGESSSAGGAGGGSVAQPMAAPKRRPTANENAALRISSSSNTCTCTPSPTCALHASANSNLSSSSREQPHETANNNNNNPQNVVRIPSSLWPISDVQRALQSDSFQVLQPTTTAATPPPPPPSSSNNNNNNTTLGILQLDDGSFIYPQPVFDSSHHHHQIHHGHQHTPFNPLYHRGYQPFFSTADTSPFRPASINYMENLPHHHHHHHPYGGSSSSSSTPSPLPWSTVIRPRAIPVSLTHRVGGSNRESNNTRNNYPFSSPAGRGTITVTQNRGNSSSSSLFPGGSPSTRLLESLVQNAGTPSSGSGAGQNNTAGTTVGAVPAVQQLSNVARAWIRRLNAHDEALTRTSQSSTRDNTPHRALRASPIAEIYNLPTYFADDSRRLRQEIRTAIDHLRNGGSVRLEELLILDYSIVLNLLDNIEEEEDDADMPQQFYEYLGDGQRVTNPDLGLTETEVAVCIGREIFRTVGGQPQNIDACGICQEDYVHGEELGRLDCAHRYHLSCIRQWLLIKNRCPICKKMALTIIDLEDDEDDDE* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0634 716 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HIP1-RELATED 232 703 - -
Ahy15g0634 716 Pfam Ring finger domain 657 699 IPR001841 -
Ahy15g0634 716 MobiDBLite consensus disorder prediction 421 469 - -
Ahy15g0634 716 SUPERFAMILY RING/U-box 651 706 - -
Ahy15g0634 716 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 232 703 IPR045191 GO:0061630
Ahy15g0634 716 ProSiteProfiles Zinc finger RING-type profile. 658 699 IPR001841 -
Ahy15g0634 716 MobiDBLite consensus disorder prediction 236 265 - -
Ahy15g0634 716 MobiDBLite consensus disorder prediction 422 469 - -
Ahy15g0634 716 MobiDBLite consensus disorder prediction 290 315 - -
Ahy15g0634 716 SMART ring_2 658 698 IPR001841 -
Ahy15g0634 716 MobiDBLite consensus disorder prediction 181 208 - -
Ahy15g0634 716 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 646 703 IPR013083 -
Ahy15g0634 716 CDD RING-H2_TTC3 658 699 - -
Ahy15g0634 716 MobiDBLite consensus disorder prediction 384 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0634 Ahy-Chr15 8323455 8329791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g0634 567 703 C3H Transcription Factor Family AT2G15530 35.616 3.19e-24 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0634 - - adu:110280903 1118.61