Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0632 ATGTTTTTCGAAAATGTTTCTTCTTCAGTTGCTGGCCCTAGGGATCATAGAGAGGCTTCTATCATGCTCCCAATTAACAATAATAACGCTGGTGCTGAAATAATTTACATCAGTGACGAAGAACCAGATCTTGAATCATCATTGTCAGAGGTCAACATTAATTCTGCCCCTTCAATTTTATCAACAACGGAACAAACCAATCAACCTGCCTCAAATCTTTTAACATTACAAAGAAATTTGGGAATCAACACCGCCAACAACAACCACCAACAAGATGGTGTGTCACTCGATTTATCCTTACATCAGTTTGGCGGTGATGGTGGTGGCAGCTCTTCTACTATGGATGTCACCGATGGCGGCACTGGTGGTGGTGGTGGTGGAGGTGGAGATGGTCTCTTGATGAGGGTTTTCAACAATACTTCTACTAGGCGTATCATGCCTATGAAAAGAACTGCACCTGATTACGCTCACCGAGAGTTTACGGTGGGTGAGAGCTCAAGTGACGGTGGTGCTGCTGGTGGTTCTGTTGCTCAACCTATGGCAGCCCCCAAGCGCCGCCCCATCGCAAATGAAAATGAGGCTGTGCGCATTTCATCATCATCATCTAATACCTGCACTTGTACTCCTTCTCCCACTTGCCCTCTCCATGCTTCCACCAATAATAATATTACTTCATCTTCCAGGGAACAACGCCATGAAACTGCTAACAACAACAACAACCCCCAAAATGTTGTTCGTGTTCCTTCTAGTTTGTCGCCAATTTCTGAGATGCAACGAGCTCTTCAGTCTGGTAGCTTTCAAGTCCTTCAACCTACTACTACTACTCCTCCTCCTCCTCCTAACAACAACAACAACAACAACAACAACGCAACACATGGTATTCTGCAACTTGATGATGGTTCCTTTATTTACCCGCAACCTGTTTTTGATAGTAGCCACCACCACCAACTCCACCATGGCCATCAACGTTATTTCTCCTCTACTGACACTTCTCCATTCCGCCCAGCCTCAATCAATCACATGGAAAATCTTCCTCATCATCAGTACGCCGGTTCTTCGTCTTCGTCTCCTTCCCCTCTTCCTTGCAGCACTGTGATTAGGCCAAGGGCTATTCCCTCTGTGTCTCTCCCTCACCGAGTTGGAGGAAGTAATAGAGAATCTGACACCGGAAACAACTATTCTTCTGGAAGGGGAATAATCACTGTGACTCACAATCGTGGAAACTCATCATCATCATCAACACAGCTAGTGGAAAGCCTTGTACAAAACGCTGGTACCCCTTCTGCATTTCAGCACCTGTCGGACGCTGCTCTTGCATGGATTGGAAGGCTGAACTCTCACGACGCGACCTTGACGAGAATGTCATCATCTTCTACCACTGATAATACTCATCACAGGCCATTGCAAGCTTCTGCTATTGCTGAGGAGGCCTATAATTTGCCTACTTATTTTGCTGATGATTCAAGAAGGCTTAGAAGAGAGAGCCGCAGTGCCATTCAACATCTGCCTAATGGAGACTCCGTTCGACTCGAGGAGCTTTTAATCCTTGATTACTCCAACTTGCTTGCCAGCATTGAGGAGGAGGAGGATGCGAATTTGCCGCAATATGAGCCTCTGGCAGACGGGCAGCGAGTGACGAACCCTGATTTAAGACTGACGGAAACTGAGGTTGCAGCATGTATTGGGCGGGAAATTTTCCAAACTGTTGATGAGCAGCCTCAGAACATTGATGCATGCGGCATATGTCAAGAGGACTATGTTCACGGTGAAGAGCTTGGGAGATTGGATTGTGCGCACAGATATCACCTTTCTTGCATCAGGCAGTGGTTGCTCATCAAGAACAGATGCCCCGTTTGCAAGAAAATGGCTCTCACCATCATAGACTTGAGGATGACGAGGAACATGCCATGA 1911 0.4652 MFFENVSSSVAGPRDHREASIMLPINNNNAGAEIIYISDEEPDLESSLSEVNINSAPSILSTTEQTNQPASNLLTLQRNLGINTANNNHQQDGVSLDLSLHQFGGDGGGSSSTMDVTDGGTGGGGGGGGDGLLMRVFNNTSTRRIMPMKRTAPDYAHREFTVGESSSDGGAAGGSVAQPMAAPKRRPIANENEAVRISSSSSNTCTCTPSPTCPLHASTNNNITSSSREQRHETANNNNNPQNVVRVPSSLSPISEMQRALQSGSFQVLQPTTTTPPPPPNNNNNNNNNATHGILQLDDGSFIYPQPVFDSSHHHQLHHGHQRYFSSTDTSPFRPASINHMENLPHHQYAGSSSSSPSPLPCSTVIRPRAIPSVSLPHRVGGSNRESDTGNNYSSGRGIITVTHNRGNSSSSSTQLVESLVQNAGTPSAFQHLSDAALAWIGRLNSHDATLTRMSSSSTTDNTHHRPLQASAIAEEAYNLPTYFADDSRRLRRESRSAIQHLPNGDSVRLEELLILDYSNLLASIEEEEDANLPQYEPLADGQRVTNPDLRLTETEVAACIGREIFQTVDEQPQNIDACGICQEDYVHGEELGRLDCAHRYHLSCIRQWLLIKNRCPVCKKMALTIIDLRMTRNMP* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0632 636 MobiDBLite consensus disorder prediction 346 365 - -
Ahy15g0632 636 MobiDBLite consensus disorder prediction 313 339 - -
Ahy15g0632 636 SMART ring_2 579 619 IPR001841 -
Ahy15g0632 636 MobiDBLite consensus disorder prediction 323 337 - -
Ahy15g0632 636 MobiDBLite consensus disorder prediction 346 362 - -
Ahy15g0632 636 SUPERFAMILY RING/U-box 578 627 - -
Ahy15g0632 636 ProSiteProfiles Zinc finger RING-type profile. 579 620 IPR001841 -
Ahy15g0632 636 MobiDBLite consensus disorder prediction 163 182 - -
Ahy15g0632 636 Pfam Ring finger domain 578 620 IPR001841 -
Ahy15g0632 636 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HIP1-RELATED 212 624 - -
Ahy15g0632 636 MobiDBLite consensus disorder prediction 269 293 - -
Ahy15g0632 636 CDD RING-H2_TTC3 579 620 - -
Ahy15g0632 636 MobiDBLite consensus disorder prediction 218 245 - -
Ahy15g0632 636 MobiDBLite consensus disorder prediction 380 394 - -
Ahy15g0632 636 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 562 624 IPR013083 -
Ahy15g0632 636 MobiDBLite consensus disorder prediction 374 394 - -
Ahy15g0632 636 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 212 624 IPR045191 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0632 Ahy-Chr15 8274427 8279210 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g0632 494 624 C3H Transcription Factor Family AT2G15530 32.168 2.64e-20 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0632 - - aip:107640059 1048.11