Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0621 ATGTGGGATCTGAATGACTCTCCCGACCACAGAAAGGACTACGACTCTGAAGAAGCTTGTTCTTCACCCAAGACTACCACTACTTCCATGGACGATGACGTCAGAGGCAAGACCCTCCGATCTGCCTCCAATTCCAGCTCCTCTGCAGTCCTCCTAGAAGACGGATCCGAAGAAGACGAAGAACAAGCCAGCAGAACAACAACTACTCTCAACAACATCAACAGTAGCAGCAAGATATTCGGCTTCTCCGTCACCCCCATGGACGGTGACGACAACCCTCCCGTCACCCACCAGTTTTTCCCGGTGGAGGACTCCGGCTGTGGCGGAGGAGGAGGAGGAGGAGGAAGCTCGTCGTCGTCGTCGTTCCCTCGAGCTCACTGGGTTGGCGTGAAGTTCTGCCAATCGGAAGCAGTAGTTGGGGGCGGTGGGAAATCGGCGGCGGTGGAAGTCTCTCAGCCTATGAAGAAGAGCCGGAGAGGACCAAGGTCTCGGAGCTCACAGTATAGAGGAGTCACCTTTTACCGAAGAACGGGTCGTTGGGAATCTCATATTTGGGATTGTGGAAAACAAGTTTATCTGGGTGGATTTGACACCGCACATGCAGCTGCTCGTGCTTATGATAGAGCGGCAATTAAGTTCCGCGGAGTGGAGGCTGACATTAACTTCAACATAGAAGACTACGAAGAAGACTTGAAGCAGATGACGAATTTGACAAAGGAAGAATTTGTGCACGTGCTTCGGCGACAAAGCACTGGCTTTCCAAGAGGAAGTTCCAAATATAGAGGTGTTACCTTGCACAAGTGTGGAAGATGGGAGGCTCGTATGGGCCAATTTCTAGGCAAAAAGTACGTTTATCTGGGCCTCTTTGATACTGAGATTGAAGCTGCCAGGGCTTATGACAAAGCAGCAATCAAATGCAATGGCAAAGAGGCCGTCACCAATTTTGATCCCAGCATCTATGAAAACGAGCTTAATTCTGAATCGTCAGGAGGCAACGGTGCAGCAGATCACAATCTGGATCTAAGTTTGGGCAATCCAAGTTCAAAGCATAGCAGTAATCAAGCACTGGGGACAACGGATTGGCACAATGAGGGAGCCAACAATAACAAGCATAAGCTGGTGAATATACTACCAAAACCATGTAGTAGTAGAAGCAACATAGAGCAGCATGGACAGCGTGAGAGTGAAGCCATGGCCCCAATGCCGCGGCTGCATCAAACTCAATTTCCGCTCTCAAACGAAATGCATAGATACGGTCCTTATTATAGATCCCATCATGCAGCTGGAGACACTCCGCATCAAATGCTACACGCGTTTCCACCAAATTTTCATTTTCCAAGCAGCAGCAAAGGAGGCCGAATTGGAAGCGAGCTTTCGCTGTCATCATCAATGAGCGATCAAGAACAACATGTACAGTGGCAAGCAGGAGCTGGAGGAGGGCCTCCACATTTGTTAGCAACTGCTGCTGCAGCATCATCAGGATTCCCGCCGCAGATTTTAACACCCTCCCAAGGTTGGATCCACAAAAATGGCTTCCACACTCTCATGAGACCCTCTTAA 1560 0.4968 MWDLNDSPDHRKDYDSEEACSSPKTTTTSMDDDVRGKTLRSASNSSSSAVLLEDGSEEDEEQASRTTTTLNNINSSSKIFGFSVTPMDGDDNPPVTHQFFPVEDSGCGGGGGGGGSSSSSSFPRAHWVGVKFCQSEAVVGGGGKSAAVEVSQPMKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFNIEDYEEDLKQMTNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAARAYDKAAIKCNGKEAVTNFDPSIYENELNSESSGGNGAADHNLDLSLGNPSSKHSSNQALGTTDWHNEGANNNKHKLVNILPKPCSSRSNIEQHGQRESEAMAPMPRLHQTQFPLSNEMHRYGPYYRSHHAAGDTPHQMLHAFPPNFHFPSSSKGGRIGSELSLSSSMSDQEQHVQWQAGAGGGPPHLLATAAAASSGFPPQILTPSQGWIHKNGFHTLMRPS* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0621 519 CDD AP2 258 318 IPR001471 GO:0003700|GO:0006355
Ahy15g0621 519 Gene3D AP2/ERF domain 258 317 IPR036955 GO:0003700|GO:0006355
Ahy15g0621 519 Gene3D AP2/ERF domain 166 225 IPR036955 GO:0003700|GO:0006355
Ahy15g0621 519 PANTHER AP2 DOMAIN TRANSCRIPTION FACTOR 1 517 - -
Ahy15g0621 519 MobiDBLite consensus disorder prediction 323 367 - -
Ahy15g0621 519 ProSiteProfiles AP2/ERF domain profile. 167 223 IPR001471 GO:0003700|GO:0006355
Ahy15g0621 519 MobiDBLite consensus disorder prediction 452 467 - -
Ahy15g0621 519 SUPERFAMILY DNA-binding domain 258 318 IPR016177 GO:0003677
Ahy15g0621 519 PRINTS Ethylene responsive element binding protein signature 260 271 IPR001471 GO:0003700|GO:0006355
Ahy15g0621 519 PRINTS Ethylene responsive element binding protein signature 298 318 IPR001471 GO:0003700|GO:0006355
Ahy15g0621 519 MobiDBLite consensus disorder prediction 1 70 - -
Ahy15g0621 519 SUPERFAMILY DNA-binding domain 166 224 IPR016177 GO:0003677
Ahy15g0621 519 CDD AP2 167 224 IPR001471 GO:0003700|GO:0006355
Ahy15g0621 519 SMART rav1_2 167 229 IPR001471 GO:0003700|GO:0006355
Ahy15g0621 519 SMART rav1_2 259 322 IPR001471 GO:0003700|GO:0006355
Ahy15g0621 519 Pfam AP2 domain 167 215 IPR001471 GO:0003700|GO:0006355
Ahy15g0621 519 Pfam AP2 domain 258 307 IPR001471 GO:0003700|GO:0006355
Ahy15g0621 519 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 517 - -
Ahy15g0621 519 MobiDBLite consensus disorder prediction 1 19 - -
Ahy15g0621 519 MobiDBLite consensus disorder prediction 447 467 - -
Ahy15g0621 519 ProSiteProfiles AP2/ERF domain profile. 259 316 IPR001471 GO:0003700|GO:0006355
Ahy15g0621 519 MobiDBLite consensus disorder prediction 144 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0621 Ahy-Chr15 7940614 7943708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g0621 1 352 AP2-EREBP Transcription Factor Family AT4G36920 68.785 1.33e-139 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Ahy15g0621 AP2 3.60E-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0621 K09284 - gmx:100801975 627.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g0621 15 7940614 7943708 Ahy15g0621 15 7940614 7943708 ECH