Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0611 ATGTTTTTCGAAAATGTTTCTTCCTCAGTTGCTGGCCTTAGGGATCACAGAGAAGCTTCTATCATGCTCCCAATTAACAATAATAACGCTGGTGTTGAAATAATTTACATCAGTGACGACGAAGAACCAGATCTTGAATCATCATTGTTAGAGAGCCGCAGTGACATTCAACATCTGCCTAATGGAGACTCCGTTCGAGAACTCGAGGAGCTTCTAATCCTTGATTACTCCAACTTGGTTGCCAGCATTGAGGAGGAGGAGGATGCGAATTTGCGGCAATATGAGCCTCTGGGAGACGGGCAGCGAGTGACGAACCCCAATTTAGGACTGACGGAAACTGAGGTTGCAGCATGTATTGGGCGGGAAATTTTCCAAACTGTTGGTGAGCAGCCTCAGAACATTGATGCATGCGGCATATGTCAGGAGGACTATGTTCACGGTGAAGAGCTTGGAAGATTGGATTGTGCGCACAGATATCACCTTTCTTGCATCAGGCAGTGGTTGCTCATCAAGAACAGATGCCCTGTTTGCAAGAAAATGGCTCTCACCATTATAGACTTGGAGGATGACGAGGAACATACCATGAGTTTATTTTAG 597 0.4556 MFFENVSSSVAGLRDHREASIMLPINNNNAGVEIIYISDDEEPDLESSLLESRSDIQHLPNGDSVRELEELLILDYSNLVASIEEEEDANLRQYEPLGDGQRVTNPNLGLTETEVAACIGREIFQTVGEQPQNIDACGICQEDYVHGEELGRLDCAHRYHLSCIRQWLLIKNRCPVCKKMALTIIDLEDDEEHTMSLF* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0611 198 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 34 182 IPR045191 GO:0061630
Ahy15g0611 198 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HIP1-RELATED 34 182 - -
Ahy15g0611 198 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 120 182 IPR013083 -
Ahy15g0611 198 Pfam Ring finger domain 136 178 IPR001841 -
Ahy15g0611 198 SMART ring_2 137 177 IPR001841 -
Ahy15g0611 198 ProSiteProfiles Zinc finger RING-type profile. 137 178 IPR001841 -
Ahy15g0611 198 SUPERFAMILY RING/U-box 136 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0611 Ahy-Chr15 7749537 7751749 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g0611 90 182 C3H Transcription Factor Family AT2G15530 40.206 2.40e-19 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0611 - - ahf:114925318 387.111