Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0572 ATGAGTTGCAACGGGTGCCGAGTCCTTAGGAAGGGTTGCAGCGAGTCATGCATCTTAAGGCCATGCCTTCAGTGGATCGAAACCGCCGAGGCCCAAGGCCACGCCACCGTCTTCGTGGCCAAATTCTTTGGTCGCGCCGGCCTCATGTCCTTCATTTCCAATGTCCCTGAGCCCCAAAGACCCGCTCTTTTTCAGTCTCTACTTTTCGAAGCATGTGGGCGAACGGTTAACCCGGTTAACGGTGCCGTTGGACTACTGTGGACTGGAAACTGGCACGTGTGCCAGGCCGCCGTTGAAACGGTGCTCCGAGGAGGCTCCCTCAGGCCTATGCCGGAGCTACTCGGTCTCGACGCGCCTGTTCCTGTCGCTGTTGACGCCGGCTCCGAGGGGGAAGTCACGTGCGCTGACGCGCGGAAGCTCCGAGACCCGAACCCGAGTCCGAGCATAAGGTTCACGAGCTCCCGATCTGGTAAAGACAGTTCCGGCTGGAAGCGGAAGCGATCGGAGGAGTCGATGATGACGACGGCGGACCTTAACCTTCGGCTGACGCCGAGTTCCGTGCATAGCGGTTGCCGGCAGGAAATTCGGCGGCCGGGAACGCCGTCGATGAATTCGGAGGAATCGGTGACGACGATGGCGTGCTTGGATAGCGGACTCGGAGATAACTACGCTCACGGCGGAGACCGGAAAGTCCTCAACCTTTTCATCTGA 711 0.5963 MSCNGCRVLRKGCSESCILRPCLQWIETAEAQGHATVFVAKFFGRAGLMSFISNVPEPQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGSLRPMPELLGLDAPVPVAVDAGSEGEVTCADARKLRDPNPSPSIRFTSSRSGKDSSGWKRKRSEESMMTTADLNLRLTPSSVHSGCRQEIRRPGTPSMNSEESVTTMACLDSGLGDNYAHGGDRKVLNLFI* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0572 236 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 236 - -
Ahy15g0572 236 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 236 - -
Ahy15g0572 236 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Ahy15g0572 236 MobiDBLite consensus disorder prediction 135 172 - -
Ahy15g0572 236 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Ahy15g0572 236 MobiDBLite consensus disorder prediction 187 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0572 Ahy-Chr15 7122766 7124358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g0572 1 236 AS2 family AT4G37540 58.167 4.03e-84 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy15g0572 LOB 2.90E-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0572 - - gmx:100816189 383.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g0572 15 7122766 7124358 Ahy11g1131 11 33018008 33019404 ECH
Ahy17g3235 17 134446241 134447330 Ahy15g0572 15 7122766 7124358 ECH
Ahy15g0572 15 7122766 7124358 Ahy15g0572 15 7122766 7124358 ECH