Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0550 ATGGATACATTGTTTAGAGTAGTGAGTTTTGAACAATACCAACAACAGCAACAAGTTGAGTTAGATCAGTCCCTCAACTCCACCACCACTACCACTACTTCCAGCAGCTCTAGATCCTCCCGACACAACTATCACCACTACCAACAACAACAACAAGACGAAGAATGCTTCAACTTTTTCATGGATGAAGAAGACCTCTCCTCGTCTTCTTCCAAGCACCACTACTATCCCTATCACTCTCAATCCCATCCCCACACTTCCACTCCTCCCGCCACCATCCTCACGCCCAACGACTTCTCCCACTCCTTCGACTTCAACCTCCAATTCTCATCAAACACCAAGTGGGCCACCGACATCCTCCTCGACGCCGCCCGTGCTCTTGCCGACAAGAACACCGCCCGTCTCCAGCACCTCATGTGGATGCTCAACGAGCTCAGCTCCCCTTACGGCGACACCGAACAGAAGCTCGCCGCCTACTTCCTTCAAGCGCTCTTCAGCCGCATGACGCATGCCGGTGATCGAACCTTCCGAACCTTAACCTCCGCCTCCGATAAGACCTGCTCCTTCGAATCAACCAGAAAGACGGTGCTCAAGTTCCAAGAGGTGTCTCCGTGGACGACCTTCGGACACGTGGCAGCCAATGGCGCAATCTTGGAAGCTTTGGAAGGTGAAACAAAGTTGCACATAGTTGATATCAGCAACACCTATTGCACTCAATGGCCAACGCTATTTGAGGCCTTGGCCACTCGCTCCGACGACACCCCGCACCTCAGGCTCACAACCGTCGTCGTAACAACTGCTCACGGCGGATCTGTCCCGGCGGCGCAGAGGGTCATGAAGGAGATAGGTGCCAGGATGGAGAAGTTCGCCAGGCTCATGGGAGTTCCGTTCAAGTTCAACGTCGTTCACCATTCCGGCGATCTCTCCCAGTTCGATTTCGGGGAATTGGACATCAGGGACGACGAGGCGCTGGCCGTTAACTGCGTCAACTCGTTGCACTCGATCGCCGCGGTTGGGAACCGCCGCGACGCGGTGATATCGTCGCTGAGAAGGCTTCAGCCCAGGATCGTGACGGTGGTGGAGGAAGAAGCCGATTTGGACGTTGGTTTGGAAGGATTCGAATTCGTGAAAGGGTTCCAAGAATGCTTGAGGTGGTTTAGGGTTTACTTTGAGGCGCTGGAGGAGAGTTTTCCGAGGACGAGTAACGAGAGGCTGATGCTGGAGAGGGCGGCGGGGAGGGCGATGGTGGACTTGGTCGCGTGCTCGGCGGAGGAATCGTCGGAGAGGAGGGAGACGGCGGCGAGATGGTCGCAGAGGATGCATGGATCGGGGTTCAATACGGCGTCATTTAGCGAGGAAGTGTGCGATGACGTTAGGGCGCTGCTGAGGAGGTACAAGGAAGGGTGGTCAATGGTACAGTGCTCGGATCACGGCGGAATGATGCTGTGGTGGAAGGAGCAGGCGGTGGTGTGGGCCAGTGCATGGAGGCCCAGCTTCACGTAG 1503 0.5569 MDTLFRVVSFEQYQQQQQVELDQSLNSTTTTTTSSSSRSSRHNYHHYQQQQQDEECFNFFMDEEDLSSSSSKHHYYPYHSQSHPHTSTPPATILTPNDFSHSFDFNLQFSSNTKWATDILLDAARALADKNTARLQHLMWMLNELSSPYGDTEQKLAAYFLQALFSRMTHAGDRTFRTLTSASDKTCSFESTRKTVLKFQEVSPWTTFGHVAANGAILEALEGETKLHIVDISNTYCTQWPTLFEALATRSDDTPHLRLTTVVVTTAHGGSVPAAQRVMKEIGARMEKFARLMGVPFKFNVVHHSGDLSQFDFGELDIRDDEALAVNCVNSLHSIAAVGNRRDAVISSLRRLQPRIVTVVEEEADLDVGLEGFEFVKGFQECLRWFRVYFEALEESFPRTSNERLMLERAAGRAMVDLVACSAEESSERRETAARWSQRMHGSGFNTASFSEEVCDDVRALLRRYKEGWSMVQCSDHGGMMLWWKEQAVVWASAWRPSFT* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0550 500 Pfam GRAS domain family 118 496 IPR005202 -
Ahy15g0550 500 PANTHER PROTEIN SHORT-ROOT 1 496 IPR030019 GO:0003700|GO:0005634|GO:0008356|GO:0009956|GO:0043565|GO:0048366
Ahy15g0550 500 ProSiteProfiles GRAS family profile. 107 496 IPR005202 -
Ahy15g0550 500 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 496 IPR005202 -
Ahy15g0550 500 MobiDBLite consensus disorder prediction 20 48 - -
Ahy15g0550 500 MobiDBLite consensus disorder prediction 71 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0550 Ahy-Chr15 6796876 6799019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g0550 1 498 GRAS Transcription Factor Family AT4G37650 62.639 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ahy15g0550 GRAS 1.60E-107 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0550 - - gmx:100820459 668.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g0550 15 6796876 6799019 Ahy15g0550 15 6796876 6799019 ECH
Ahy15g0550 15 6796876 6799019 Ahy11g1103 11 31600649 31603214 PCT
Ahy15g0550 15 6796876 6799019 Ahy1g1078 1 21358302 21360796 PCT
Ahy11g1103 11 31600649 31603214 Ahy15g0550 15 6796876 6799019 PCT
Ahy1g1078 1 21358302 21360796 Ahy15g0550 15 6796876 6799019 PCT