Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0524 ATGGGGTCCTGCAGCGGTGTTGTAGAGGGAACGTGCCAGTGGAATGTGAGGAGCAGGGATGATTGGGTTCAACGCAGCGGTGTAGGTTTACAAGAGCAGGAAGCATTATATGACATGGGAATTGAAGCGGAGGAATACTTTGGTGACTATGAAAGTAAGGATGACGGGCGTAACGAAGGGTTCGATTCGGATGAAGGAGTGGGGCCAGATGATGTTCTTCGAATGGAATTTAACAGTCCAGATGAAGCCAAATCCTTTTATAATAACTATAGCCGATTAAAGGGGTTTTCTATGAGGCAAGGGAGGAAGGTAACAAATAGTGCAGGGGATATTGTGCGATACACATTTGTGTGCAATAGGCAAGGGTATCGGGAGAAGAAATGGCTAGAGATGGCTAATCGAAAACGGGAGCACAAGATTGTGACTCGTTGTGGTTGCCTTGCCGAGATGAGGATAAAGAGAAAAGATGGGAGTGGCAAATGGTACGTGTCTCGGTTTGTGGATGAGCATAATCATGAACTCGCATCTGGCAAGTTCGTCGATTACTTGAGGTCGCACAGGCGGCTATCTGAAGTAGAGATTGCACAAATGACTAGCTTGAGGGAGGTTGGTATCAGCATTCCTAAAATATATGAGTCCTTCGCGGCACAGCTTGGGGGCTTTAACCTTGTGACATTCACAAAGCAAGACATGTATAATGAGGTGAGGCGACAAAGAGAAATGCAAAATGGAGATGTAAGCGCTGCAATTCGATACTTGGAAGGTGTTTCCCGTGTAGACAACAGAATATTTTGGAGGTACAAGGTTGGGTCTGAAAACAATCTTTGTGACCTATTTTGGAGTGACGGGCGCAGTCATTTCGACTATTCAATATTCGGAGATGTTCTAGCCTTCGATGCTACTTACGGCCGAAACAAGTACAATTTGCCTGTTGTTGTGTTCTCGGGAGTTAACCACCACAACCAAACATGTGTCTTCGGATGTGCAATGGTCTCGTGTGAAACGCAAGAGTCCTACATCTGGGTTCTGCAGCAGTTTTTGGAATGCATGGAAGGAAAGGCCCCTAAGGCAGTCATCACAGATGGAGATACCTCGATGCGAAATGCTATACGTCATGTATTTCCCGAAACCCATCACAGGCTATGTGCTTGGCATTTGCTTCGTAATGCGACCTCCAATATATGTGACTCACGATTCACCCAGCTATTTAGACACTGCATGCTTGCGGACATGGAGGTTGACGAGTTCGAGGCACAATGGGAGGCGATGCTGGATGAGTGTGGGGTTCGTGAAGTCGAATGGGTGAAGGATTTGTACCGCAAAAAAACTGCATGGGCGACTGCATACATCAGAGGCCGATTTTTTGCCGGCATACGGACAACGTCCCGTTGTGAGTCTCTACATGCCAAGTTAGGCAGGTTTGTGGAGAGTAGATACGGGGTCCTTGAATTTGTCACAAACTTCCAAAGATGCATTGATTTCTTGCGAGACAATGAAGACGAGCTTGAATTTCGTTCATGGTATGGAACTCCAGTCTTGCAAACTGAGTTTGTTGAGCTTGAGAAGGATGGGTGGATAAAGTACACACGGGAGATGTTTTGGAGATTTCGTGAAGCTCTTAAAAGGTGCGTTCGAATTCACATATGTGGATGCAATGAAAATGCTGAGGGTGAAGTATATGTTGTTCAAAAATATCGCAGGCCGGAAAAGAAGTGGGAGGTTTCGAGGCAACATGTGGGTAACAAATTCAGCTGCACCTGCCTGAGAATGGAATCATTCGGACTGCCCTGTGTCCACATACTAGCTGTGTTGGTGCGCTTGGATTATACTATCATTCCCAATACGCTTGTGCTCCGCAGATGGTCGAAGACAGCAAAGTTGCACTATGGCTTAAATTGCACTGGAAATGAAACACAGGAGCAAACAACAACGTATAGGTCCCGGCTGGGAGCTTTTGCTCAGCTATGCACACGACTAGGCCGGGTTGCATGCATGAGCGATGAGGACTTCAAGTACTACTCACATAAGGTACTAACTGACACAATCTGCTTGGAAATTAAGAATGGCCTTAGGCCCGCGGAAGACGTTGGAGTAACGGCGGAGGAACAACGAGTGAAGGACCCCATCAGCGTGAGAACAAAGGGTACAGGTCGACTCAGCCAGGCATCCGCATCGACCGGGAAAAAACGGCGCAAGTGCAGCAACTGTGGCCGACTCGGTCATCGAAGGACCCGTTGTCCAAATCGTGCAGGTCAGGAGGGTGGCCAGCCGTGTGTGGGCGTGAATAAGAGAGTTCGAGGTATCCAGGTGGTGCAGGAAGATGTTCCTTCCAACAACCCGGAGGCTGTGTCACTTGGCGACCTTTGA 2367 0.4778 MGSCSGVVEGTCQWNVRSRDDWVQRSGVGLQEQEALYDMGIEAEEYFGDYESKDDGRNEGFDSDEGVGPDDVLRMEFNSPDEAKSFYNNYSRLKGFSMRQGRKVTNSAGDIVRYTFVCNRQGYREKKWLEMANRKREHKIVTRCGCLAEMRIKRKDGSGKWYVSRFVDEHNHELASGKFVDYLRSHRRLSEVEIAQMTSLREVGISIPKIYESFAAQLGGFNLVTFTKQDMYNEVRRQREMQNGDVSAAIRYLEGVSRVDNRIFWRYKVGSENNLCDLFWSDGRSHFDYSIFGDVLAFDATYGRNKYNLPVVVFSGVNHHNQTCVFGCAMVSCETQESYIWVLQQFLECMEGKAPKAVITDGDTSMRNAIRHVFPETHHRLCAWHLLRNATSNICDSRFTQLFRHCMLADMEVDEFEAQWEAMLDECGVREVEWVKDLYRKKTAWATAYIRGRFFAGIRTTSRCESLHAKLGRFVESRYGVLEFVTNFQRCIDFLRDNEDELEFRSWYGTPVLQTEFVELEKDGWIKYTREMFWRFREALKRCVRIHICGCNENAEGEVYVVQKYRRPEKKWEVSRQHVGNKFSCTCLRMESFGLPCVHILAVLVRLDYTIIPNTLVLRRWSKTAKLHYGLNCTGNETQEQTTTYRSRLGAFAQLCTRLGRVACMSDEDFKYYSHKVLTDTICLEIKNGLRPAEDVGVTAEEQRVKDPISVRTKGTGRLSQASASTGKKRRKCSNCGRLGHRRTRCPNRAGQEGGQPCVGVNKRVRGIQVVQEDVPSNNPEAVSLGDL* 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0524 788 ProSiteProfiles Zinc finger SWIM-type profile. 560 608 IPR007527 GO:0008270
Ahy15g0524 788 Pfam MULE transposase domain 295 389 IPR018289 -
Ahy15g0524 788 SUPERFAMILY Retrovirus zinc finger-like domains 713 753 IPR036875 GO:0003676|GO:0008270
Ahy15g0524 788 Pfam FAR1 DNA-binding domain 85 175 IPR004330 -
Ahy15g0524 788 ProSiteProfiles Zinc finger CCHC-type profile. 731 748 IPR001878 GO:0003676|GO:0008270
Ahy15g0524 788 PANTHER OS02G0262500 PROTEIN 71 646 - -
Ahy15g0524 788 SMART 26again6 583 610 IPR006564 GO:0008270
Ahy15g0524 788 Pfam SWIM zinc finger 584 605 IPR007527 GO:0008270
Ahy15g0524 788 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 71 646 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0524 Ahy-Chr15 6416005 6425154 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy15g0524 MULE 1.70E-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0524 - - aip:107620408 1130.93