Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0498 ATGGAGGAATTAAACGGATTGGCAACCAACTGGTTATCTGATCTGGATATAGATGATTACGAATTGTTTTCAGAGTGCAATTTGAAGAAGTTTCTGGATGAGGATGAAGAGAATCAGTTTGATGAGATGGTGATGAGTGCAGTGGTGGGGGAGGAGGAGGAAGAGGAGGAGGAGAGGCCAACTAAGCAACTCAGAACTTGCTCATCATCAAGCATCACTAACTACGTCTCATCTAATTCTTCTTCTTCTTCTTCTCCCACCTCCCAGATTCTGTCTTTTGAAAACTCTTACAACCCATCCTCCCAATTTTATGGCTTTGAATTTGATGCAACTCCTAATGATAAGGTTTCACCGCAACCACAAGTTGGTAATAACAATGATAAGAACAAGCTGGAACAAACAAGGAAACCTCAAAGCCAAGGGAGTAAGAGACAGGCGGCTCACTCTCACGATCACATCATGGCTGAGAGAAAGCGAAGGGAGAAGCTCAGCCAAAGCTTGATCGCCCTTGCAGCTCTTATTCCAGGCTTAAAAAAGATGGATAAGGCTTCGGTACTGGGAGATGCAATCAAGTACGTGAAAGAGCTTCAGGGGCGATTGAAGGTTCTAGAAGAAGAGAACAAGAGAGAGGTGGAGTCTGTGGTGATTGTGAAGAATCCACGCTTCATCACGAGCAGCAGCGACGATGACTCCTCTTCCTGTGATGATGACACCTTGGAAGCAGACGGCGAAGCAGCACTAGCACACGTGGAAGCAAGAGTGGCGGCGGCCGAGAAGGAGGTGCTGCTCCGGATCCATTGCAAGAAACAGAAGGGCATTTACGTCAAATTACTGTCGGAGATACAAAGCCTTCACCTGTACGTGGTCCATAGCAGTGTGCTACCGTTCGGGGATTCGGTTCTCGACATAACCATCGTTGCTCAGATGGGCACAGAATACAAGTTGAGCATAAGAGATCTTGTGAGGAATCTACGCGTGGCTACGCTGAAAACGATGTCGTCGTCATAG 1008 0.4692 MEELNGLATNWLSDLDIDDYELFSECNLKKFLDEDEENQFDEMVMSAVVGEEEEEEEERPTKQLRTCSSSSITNYVSSNSSSSSSPTSQILSFENSYNPSSQFYGFEFDATPNDKVSPQPQVGNNNDKNKLEQTRKPQSQGSKRQAAHSHDHIMAERKRREKLSQSLIALAALIPGLKKMDKASVLGDAIKYVKELQGRLKVLEEENKREVESVVIVKNPRFITSSSDDDSSSCDDDTLEADGEAALAHVEARVAAAEKEVLLRIHCKKQKGIYVKLLSEIQSLHLYVVHSSVLPFGDSVLDITIVAQMGTEYKLSIRDLVRNLRVATLKTMSSS* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0498 335 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 152 210 IPR036638 GO:0046983
Ahy15g0498 335 MobiDBLite consensus disorder prediction 145 159 - -
Ahy15g0498 335 SMART finulus 153 202 IPR011598 GO:0046983
Ahy15g0498 335 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 147 196 IPR011598 GO:0046983
Ahy15g0498 335 Coils Coil 186 213 - -
Ahy15g0498 335 MobiDBLite consensus disorder prediction 108 159 - -
Ahy15g0498 335 MobiDBLite consensus disorder prediction 49 91 - -
Ahy15g0498 335 Gene3D - 128 212 IPR036638 GO:0046983
Ahy15g0498 335 PANTHER TRANSCRIPTION FACTOR NAI1 32 330 - -
Ahy15g0498 335 PANTHER BHLH TRANSCRIPTION FACTOR 32 330 - -
Ahy15g0498 335 MobiDBLite consensus disorder prediction 64 91 - -
Ahy15g0498 335 Pfam Helix-loop-helix DNA-binding domain 152 197 IPR011598 GO:0046983
Ahy15g0498 335 MobiDBLite consensus disorder prediction 114 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0498 Ahy-Chr15 6028775 6031013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g0498 7 327 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 36.176 5.71e-53 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy15g0498 HLH 2.90E-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0498 - - adu:107487595 579.711