Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0494 ATGACCAAACCACCCTCCGCCTTCGACGCTCTCATGTCCGGTGCTCGCGCCGCCGCCGCCGCCGCTGCCAAGAAGAAGAAATCCGAGCAGTCGCAGCAACCAACTGCTTCTTCTTCCAAGAAGCGAAAACCTTCATCCTCCACTCTCCCCACTCCAACCTCCACGCTAAACCCTAATGAAGAACCGGAGAAAGAAGGCCCTCCTCCGACCAAGACTCGCCACGTGTCTTCTTCATCTGCCTTGCAGGAGCTGAAGAAGCGCGTTCCGCAGCTGACGGCGAAGCCTTCGAAATTCGATCCTAGCTCAGTGGCTTGTTGGGAGAAGGGCACGCCTGTGCCGTTCTCGTTACTGGCGTTGGCGCTTGACATGATTTCTCTGGAGCCTGGCAGAATCAAGATGACAGATATTGCGTGCAATTTGATGAAGACTGTGATATACTCTACCCCTGAGGATCTTGTGCCTCTGATTTATCTCTTGGCGAAGAGGGTTGCTCCGGCGCATGAAGGGCTGGAATTGGGAATTGGCGAGACTTCCATTATTAAGGCACTTGCTGAGGCAACTGGAAGAACTGAATCCAAAATCAAGAAGCTGTATCAGGACGAGGGTGATTTGGGAAAAGTTGCCAAGGAATGCCGTTCATCTCAGTCCATGATGCGGAAGCCTGAGGCTCTGACTATTAGGAAGGTTTTCAACACCTTCCGTCTTATTGCCAAGGAATCTGGAAGAGACAGTCAAATGAAGAAAAAGAATCATATAAAGGCACTTCTTGTTGCTGCAACTGACTGCGAACCTAAATATCTTATCCGTTTTCTACAGGGAAAATTGCGGATTGGTGTGGCTGAGCAAACTCTCTTAGCTGCATTAGGCCAAGCAGCAGTACAGAGTGAAGAACATTCTAAACCACCTGCTGGTATTAAGTCTCCTTTGGAAGAGGCTGTAAAAATTGTTAAACAAGTCTATTCTGTTCTACCTGTCTACGACGAAATAGTATCTGCACTTCTTACACATGGTGTATGGAAACTTCCATCAACATGTAATTTTACTCCTGGTATTCCAGTTGGACCTATGCTGTCAAAACCGAGGAAGGGTATCTCTGATATTCTAAATTCATTGCAAGATGTGCAGTTTACTTGTGAATACAAGTATGATGGAGAGCGTGCCCAGGTACATTACATGGAAAATGGTTCAGTTGAGATTTATAGTAGAAATGCTGAGCGGAATACTGGGAAGTTTCCTGATGTTGTTGCTGCAATTTCAAGGTTAAAGAAATCAACTGTATCATCATTTGTTCTTGATTGTGAAATTGTTGGATATAATCGTGAGAAACAGACCATCCGTCCTTTCCAGGATCTTACTACTCGGCCTCGTAAAAATGTATCTGTGGATAATATAAAGGTTGATGTCTGCATATTTGCTTTTGATATACTGTATCTTAATGGCCGAGTACTTCTTCAGGATAACCTGAAAATCCGTAGAGAGCATCTTTATGCCTCTTTTGAAGAAGAAACTGGAGTTTTTCAGTATGCAACGGCAATAACATCAAATGACACTGAGGAAATTCAGAAATTTCTCGACAAAGCTGTTGGATCAAGCTGTGAGGGATTAATCATTAAAACTTTAAATGAAGATTCTACATATGAACCTTCCAATCGGTCAAACAATTGGCTAAAACTGAAGAAAGATTATCTGGATAACATAGGGGACTCGATGGATTTGGTACCTATAGCTGCATTCCACGGACGTGGGAAACGTACAGGAGTCTATGGTGCTTTTCTTCTTGCTTGCTATGACTACAATAACGAAGAATTTCAAAGTATTTGTAAGATTGGAACAGGATTTACTGAAGAAGTGCTCGAAGAGCGTTCTAAAAGTCTTGGTTCTCAAGTGATTCCTGGGCCAAAGCGATACTATCGATATGGAGATAAAATGAAGCCTGATGTCTGGTTTGAAGCTAGCGAGGTATGGGAGGTGAAAGCTGCAGATTTGACCATCAGCCCAGTTCACCGAGCTGCAGTGGGCATAGTAGATTCAGATAAGGGCATATCTCTTAGATTCCCACGGCTAGTTCGAGTTCGACCTGACAAAACACCCGAGCAGGCCTCATCATCTGAGCAGGTTGCTGAGATGTATAATGTTCAAAAAGCCACTCAAACTAAAGAAAAAGAAACAACCAAACAGGATGGTAGTGAGTCACCAAAAAAACAGATTTGCAGCGAAGACGAAGATGAAGACGAAGACGAAGTCGCAGATGAAGATGTAGATGTAGATGTAATGCATATGAAGATGAAGATAAGTGAGCTGCTGTCATACACTATTGTACCAATAGAATCTCAGCATTTTTGCTGA 2346 0.4382 MTKPPSAFDALMSGARAAAAAAAKKKKSEQSQQPTASSSKKRKPSSSTLPTPTSTLNPNEEPEKEGPPPTKTRHVSSSSALQELKKRVPQLTAKPSKFDPSSVACWEKGTPVPFSLLALALDMISLEPGRIKMTDIACNLMKTVIYSTPEDLVPLIYLLAKRVAPAHEGLELGIGETSIIKALAEATGRTESKIKKLYQDEGDLGKVAKECRSSQSMMRKPEALTIRKVFNTFRLIAKESGRDSQMKKKNHIKALLVAATDCEPKYLIRFLQGKLRIGVAEQTLLAALGQAAVQSEEHSKPPAGIKSPLEEAVKIVKQVYSVLPVYDEIVSALLTHGVWKLPSTCNFTPGIPVGPMLSKPRKGISDILNSLQDVQFTCEYKYDGERAQVHYMENGSVEIYSRNAERNTGKFPDVVAAISRLKKSTVSSFVLDCEIVGYNREKQTIRPFQDLTTRPRKNVSVDNIKVDVCIFAFDILYLNGRVLLQDNLKIRREHLYASFEEETGVFQYATAITSNDTEEIQKFLDKAVGSSCEGLIIKTLNEDSTYEPSNRSNNWLKLKKDYLDNIGDSMDLVPIAAFHGRGKRTGVYGAFLLACYDYNNEEFQSICKIGTGFTEEVLEERSKSLGSQVIPGPKRYYRYGDKMKPDVWFEASEVWEVKAADLTISPVHRAAVGIVDSDKGISLRFPRLVRVRPDKTPEQASSSEQVAEMYNVQKATQTKEKETTKQDGSESPKKQICSEDEDEDEDEVADEDVDVDVMHMKMKISELLSYTIVPIESQHFC* 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0494 781 MobiDBLite consensus disorder prediction 718 738 - -
Ahy15g0494 781 Gene3D - 89 357 IPR036599 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Ahy15g0494 781 Pfam DNA ligase N terminus 113 288 IPR012308 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Ahy15g0494 781 Pfam ATP dependent DNA ligase C terminal region 584 695 IPR012309 GO:0003910|GO:0006281|GO:0006310
Ahy15g0494 781 MobiDBLite consensus disorder prediction 715 753 - -
Ahy15g0494 781 CDD Adenylation_DNA_ligase_I_Euk 344 562 - -
Ahy15g0494 781 Gene3D DNA ligase/mRNA capping enzyme 384 509 - -
Ahy15g0494 781 ProSiteProfiles ATP-dependent DNA ligase family profile. 461 597 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Ahy15g0494 781 TIGRFAM dnl1: DNA ligase I, ATP-dependent (dnl1) 171 710 IPR000977 GO:0003910|GO:0005524|GO:0071897
Ahy15g0494 781 Gene3D - 365 563 - -
Ahy15g0494 781 Pfam ATP dependent DNA ligase domain 355 559 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Ahy15g0494 781 CDD OBF_DNA_ligase_I 567 711 - -
Ahy15g0494 781 SUPERFAMILY ATP-dependent DNA ligase DNA-binding domain 95 345 IPR036599 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Ahy15g0494 781 PANTHER DNA LIGASE 1/3 FAMILY MEMBER 23 727 - -
Ahy15g0494 781 SUPERFAMILY Nucleic acid-binding proteins 567 713 IPR012340 -
Ahy15g0494 781 MobiDBLite consensus disorder prediction 1 100 - -
Ahy15g0494 781 MobiDBLite consensus disorder prediction 739 753 - -
Ahy15g0494 781 MobiDBLite consensus disorder prediction 71 85 - -
Ahy15g0494 781 ProSitePatterns ATP-dependent DNA ligase AMP-binding site. 379 387 IPR016059 GO:0003909
Ahy15g0494 781 Gene3D - 564 727 IPR012340 -
Ahy15g0494 781 MobiDBLite consensus disorder prediction 26 60 - -
Ahy15g0494 781 ProSitePatterns ATP-dependent DNA ligase signature 2. 533 559 IPR016059 GO:0003909
Ahy15g0494 781 PANTHER DNA LIGASE 1 23 727 - -
Ahy15g0494 781 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 347 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0494 Ahy-Chr15 5900145 5907099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g0494 5 714 Core DNA Replication Machinery Family AT1G08130 64.658 0.0 974
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0494 K10747 - aip:107642653 1335.09