Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0493 ATGGCTGGTTTGGATTTAGGAACAGCTTCACGCTTCGTTCAAAACCTGCACAGACCAGAATTCAACCTGCATCACAACCATCATCATCAACAACAACATCATCATCATCATCATCACCAACAAGATTCTGAAGAAGACGCCAACAACAACCACCAAGATCACTATGAGGATGATGCTCCCCACGACCACACGGGTTTGGACCTCGCAACGGCCTCCGCGGGAGATGTCGTCGCACGCCGTCCTAGGGGTAGGCCGCCGGGATCCAAGAACAAGCCCAAGCCGCCGGTCATCATAACCAGGGAGAGCGCCAACACGCTCAGAGCACACATCCTCGAGGTAGCCAGCGGCTGCGACGTCTTTGACAGCGTCGCCACCTACGCCCGCCGCCGCCAGCGCGGGATCTGCATCCTCAGTGGCAGCGGCACCGTCAATAACGTCACCATCAGGCAACCAGCCGCCGCCGGAGCAGTAGTCACGCTCCACGGCAGGTTCGAGATATTGTCCCTCTCCGGCTCGTTCCTTCCGCCGCCGGCTCCCCCCGGCGCCACCAGCCTAAGCATATACCTCGCCGGAGGGCAGGGACAGGTGGTCGGAGGGAGTGTGGTTGGAGAGTTGATCGCGGCGGGGCCGGTGATTGTGATCGCTTCTTCGTTCACGAACGTGGCTTATGAGAGGTTGCCTTTGGACGAAGATGAACAGCAGCTTCCAGGTGGCGGCGGCGGTCAGGGTTCCGGTGGTGGTGGTGGTAATAGTCCGTTTGGTGACCCGTCCTCAGGGCTTCCTTTCTTTAATTTGCCGGTGAATATGCCGAATAATGTTCAGTTGCCATCAGCAGTGGATGGGTTTTCACGTCCACCACCACCACCACCACCACCATTTTAA 882 0.5794 MAGLDLGTASRFVQNLHRPEFNLHHNHHHQQQHHHHHHHQQDSEEDANNNHQDHYEDDAPHDHTGLDLATASAGDVVARRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVASGCDVFDSVATYARRRQRGICILSGSGTVNNVTIRQPAAAGAVVTLHGRFEILSLSGSFLPPPAPPGATSLSIYLAGGQGQVVGGSVVGELIAAGPVIVIASSFTNVAYERLPLDEDEQQLPGGGGGQGSGGGGGNSPFGDPSSGLPFFNLPVNMPNNVQLPSAVDGFSRPPPPPPPPF* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0493 293 MobiDBLite consensus disorder prediction 274 293 - -
Ahy15g0493 293 MobiDBLite consensus disorder prediction 25 97 - -
Ahy15g0493 293 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 278 IPR014476 GO:0003680
Ahy15g0493 293 ProSiteProfiles PPC domain profile profile. 103 239 IPR005175 -
Ahy15g0493 293 CDD DUF296 107 190 IPR005175 -
Ahy15g0493 293 Pfam Plants and Prokaryotes Conserved (PCC) domain 107 220 IPR005175 -
Ahy15g0493 293 Gene3D - 106 235 - -
Ahy15g0493 293 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 23 1 278 - -
Ahy15g0493 293 MobiDBLite consensus disorder prediction 231 265 - -
Ahy15g0493 293 MobiDBLite consensus disorder prediction 37 64 - -
Ahy15g0493 293 SUPERFAMILY AF0104/ALDC/Ptd012-like 103 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0493 Ahy-Chr15 5863207 5864925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g0493 1 282 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 65.902 2.77e-97 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0493 - - qsu:111992217 350.132