Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy15g0486 | ATGGGAGGGGCATCACTGCCTCCGGGTTTTCGTTTCCACCCTACTGATGAAGAACTGATAGGATACTACCTGAAAAGAAAAGTTGAGGAGCTTGAAATTGAACTTGAAGTTATCCCTGTGATTGATTTGTACAAGTTTGATCCTTGGGAGTTGCCGGAGAAGTCATTCTTACCAAAAAGAGACTTGGAATGGTTCTTCTTTTGTCCAAGGGATCGAAAGTATCCGAATGGATCAAGAACAAACAGAGCTACCAAAGCAGGATACTGGAAAGCCACTGGAAAAGACAAAAAGGTTGTGTGCCAATCTAGTCCATCAACATCAATCATGAAAGCCACCGGATATCGCAAGACCCTTGTTTTCTATCGCGGAAGAGCCCCTTTAGGCGACCGAACGGATTGGGTTATGCACGAGTATCGCCTCTGTGATGATCTTGGCCAAGACTCACCAAGTTTTCAGGGTGCTTATGCTTTGTGCCGGGTTATTAAGAAGAATGACAAGGCCAGTGATTACAAGGGTAAAAGAGGTGTCAGCAGTTCCAAGAATGAGAATGAGAATGAGAATGAGAGCTCAATGAGATTGTCATCCTCTAAGGAGCACTTGAGCATCTCTGCTGATGTTTCTTCTCAAGCAAGTCAGCTATGCAGCGAGAGTCGTTATTCGAGCCCTATAGCTTCTCCTTGTGCATACAATGTGGCTGCAACGGCCGGGTTTGAGCCACCTTCTGTGGACACTAATCCTTCAACCTTCTTGGTCTCCCCTGATATGATTCTTGATTCTTCAAAGGACTTTGCTCAAACACAAGATGTTATTTCAGGATTCTTTCCGCATCATGAATTGCCAAGTACAATGACACCATGGCAATCATTGGAACATACAGAGATTTCATCCAGTTCATCCTACTCAAATTTCAATGGGGAGATAGAATTCTCTGATGAACTCGGCCTAATTGGCCGAATGTCGCGTTACTCAGGACAAGTAGACATGTTAGACTTCTATGGAAATGAGGAAGTGCTGTATGAATATGAAGGATATGACCAGATCAATTCAATCAGAGATCCAAGACAATTCTGA | 1071 | 0.437 | MGGASLPPGFRFHPTDEELIGYYLKRKVEELEIELEVIPVIDLYKFDPWELPEKSFLPKRDLEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDKKVVCQSSPSTSIMKATGYRKTLVFYRGRAPLGDRTDWVMHEYRLCDDLGQDSPSFQGAYALCRVIKKNDKASDYKGKRGVSSSKNENENENESSMRLSSSKEHLSISADVSSQASQLCSESRYSSPIASPCAYNVAATAGFEPPSVDTNPSTFLVSPDMILDSSKDFAQTQDVISGFFPHHELPSTMTPWQSLEHTEISSSSSYSNFNGEIEFSDELGLIGRMSRYSGQVDMLDFYGNEEVLYEYEGYDQINSIRDPRQF* | 357 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy15g0486 | 356 | SUPERFAMILY | NAC domain | 4 | 163 | IPR036093 | GO:0003677|GO:0006355 | |
| Ahy15g0486 | 356 | Pfam | No apical meristem (NAM) protein | 7 | 140 | IPR003441 | GO:0003677|GO:0006355 | |
| Ahy15g0486 | 356 | MobiDBLite | consensus disorder prediction | 169 | 193 | - | - | |
| Ahy15g0486 | 356 | MobiDBLite | consensus disorder prediction | 169 | 198 | - | - | |
| Ahy15g0486 | 356 | Gene3D | NAC domain | 15 | 168 | IPR036093 | GO:0003677|GO:0006355 | |
| Ahy15g0486 | 356 | PANTHER | NAC TRANSCRIPTION FACTOR-LIKE PROTEIN | 1 | 356 | - | - | |
| Ahy15g0486 | 356 | PANTHER | NAC DOMAIN-CONTAINING PROTEIN 82-RELATED | 1 | 356 | - | - | |
| Ahy15g0486 | 356 | ProSiteProfiles | NAC domain profile. | 6 | 163 | IPR003441 | GO:0003677|GO:0006355 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ahy15g0486 | Ahy-Chr15 | 5794257 | 5796754 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Ahy15g0486 | 1 | 314 | NAC Transcription Factor Family | AT4G17980 | 54.114 | 2.09e-109 | 320 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TF | NAC | Ahy15g0486 | NAM | 1.30E-38 | No_clan |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ahy15g0486 | - | - | adu:107487585 | 690.649 |