Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0443 ATGGAACTTAAGTACCACCAATTTGGCCTTGTTTGTGTCATAATGCTCTTACCTGTAATGTGTACCTCTCAAGACTCATTTACGTGCTCCAGAGCAACCTATTATGGCAGCCCTGAATGCACTGCCAACCCAACGGGAGCTTGTGGCTTTGGCGAATATGGAACGGCGATCAACGATGGCAGCGTGGCAGGCGTGTCTTGGCTATGGCGGAATGGATCTGGCTGTGGTGCATGCTATCAAGTTAGGTGCAAAATAGCAGAATACTGCGATGACTATGGAGCATATGTAGTGGTAACAGACTTCGGCGTGGGAGACAGAACCGACTTCATTATGAGTCCACGTGCTTATTCAAGATTGGCCAAGAACGAAGATGCATCTGCAGAGCTTTTCAAATACGGTGTGGTGGACGTAGAATACAAGAGGGTACCATGTAGATACGGTGGCTATAACATCATAGTCAAGGTGAATGAGCGCAGCTACAACCCACACTACTTAGCCATTGTAACTCTCTATGTTGGTGGAACACAAGACATAACTGCCGTTCAGTTCTGGCAGGAAGATTGCAAAGAATGGAGGCCAATGCGAAGGGCGTTTGGGACAGTGTTTGATGTTGAGAACCCACCAAGGGGTGACATAAAGTTAAGGTTCCAAGTGACTGGCAGTGCAGGGGTTTATTGGGTAGAGTCCAAGACCTTTATCACCAGTGATTGGAAGGCTGGAGCATCTTATGATACTCAAATCCAGCTTGAATAG 753 0.4714 MELKYHQFGLVCVIMLLPVMCTSQDSFTCSRATYYGSPECTANPTGACGFGEYGTAINDGSVAGVSWLWRNGSGCGACYQVRCKIAEYCDDYGAYVVVTDFGVGDRTDFIMSPRAYSRLAKNEDASAELFKYGVVDVEYKRVPCRYGGYNIIVKVNERSYNPHYLAIVTLYVGGTQDITAVQFWQEDCKEWRPMRRAFGTVFDVENPPRGDIKLRFQVTGSAGVYWVESKTFITSDWKAGASYDTQIQLE* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0443 250 Pfam Expansin C-terminal domain 153 227 IPR007117 -
Ahy15g0443 250 Gene3D - 17 144 IPR036908 -
Ahy15g0443 250 SUPERFAMILY PHL pollen allergen 150 244 IPR036749 -
Ahy15g0443 250 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 163 245 IPR007117 -
Ahy15g0443 250 PANTHER EXPANSIN-B1-LIKE PROTEIN 4 249 - -
Ahy15g0443 250 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 45 149 IPR007112 -
Ahy15g0443 250 Gene3D - 145 246 IPR036749 -
Ahy15g0443 250 Pfam Lytic transglycolase 62 139 IPR009009 -
Ahy15g0443 250 PRINTS Expansin/Lol pI family signature 231 245 IPR007118 GO:0005576
Ahy15g0443 250 PRINTS Expansin/Lol pI family signature 132 148 IPR007118 GO:0005576
Ahy15g0443 250 PRINTS Expansin/Lol pI family signature 26 41 IPR007118 GO:0005576
Ahy15g0443 250 PRINTS Expansin/Lol pI family signature 65 83 IPR007118 GO:0005576
Ahy15g0443 250 PRINTS Expansin/Lol pI family signature 191 205 IPR007118 GO:0005576
Ahy15g0443 250 PANTHER EXPANSIN-B3 4 249 - -
Ahy15g0443 250 SUPERFAMILY Barwin-like endoglucanases 12 148 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0443 Ahy-Chr15 5170336 5172147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g0443 10 249 Expansin Gene Family AT4G17030 61.826 5.39e-113 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0443 - - gmx:100802855 421.009