Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0384 ATGGGAAGAAGTGATGTGGAGATTGGTTTGTCTCACCAAGATGCATTGATTGAACTTGGTTGCTGTTGTAAGAATGACCTTGCTTTAGTACACTATGCTTGTGCACTCAAGTGGTTTATTAATCATGGATCAACAATTTGTGAAATATGTGGACACATAGGCAATAATATCAGAATCTCTGACTTCAACAAGGTTGTTGGTTCTCTGAAAGAATATGAAGCCTTGAGGGAGAGAACTGTCAGTAGGGATCCTGGTCCTCATGTTCATGCAAATAATAATACTGGCGTTGATCCTGACGCTGTGGCTGCTATCCGGAGGCAAAGGCTAAGTGAGATTGCATTATGGTTTTGTCCTCATAATACCAGTAGTATAAACAACAATAGCAATGCCGACACAGTTTCACAGGTTGCTTCTGAGCAGCCTTCAAATTTTGTTACTGAAGATGCTGGCCCTGCACAGAGTCCTGCAACCAAGTGGGCCGTGGAAGGCGCAGGGATCCTGCTTGCTACTGGCCTGCTTACAATCACCCTTGTGTGGCTGATAGCTCCTCGAGTTGGAAAGAAAACAGCCAAAAGTGGTCTTCACATCCTACTTGGAGGTGTTTGTGCTTTAACAGTGGTTGTTTTTTTTTCTGCTTTTTTGTGCTTATTAGAATCAAGTACGGACCTGCACGTTATTGGGCAATCTTGTTCGTTTTCTGGTTTCTTGTGTTTGCAATATGGGCTTCACGGACCTTAG 738 0.4336 MGRSDVEIGLSHQDALIELGCCCKNDLALVHYACALKWFINHGSTICEICGHIGNNIRISDFNKVVGSLKEYEALRERTVSRDPGPHVHANNNTGVDPDAVAAIRRQRLSEIALWFCPHNTSSINNNSNADTVSQVASEQPSNFVTEDAGPAQSPATKWAVEGAGILLATGLLTITLVWLIAPRVGKKTAKSGLHILLGGVCALTVVVFFSAFLCLLESSTDLHVIGQSCSFSGFLCLQYGLHGP* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0384 245 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 7 213 - -
Ahy15g0384 245 PANTHER ZINC FINGER, RING-CH-TYPE 7 213 - -
Ahy15g0384 245 ProSiteProfiles Zinc finger RING-CH-type profile. 1 57 IPR011016 GO:0008270
Ahy15g0384 245 SUPERFAMILY RING/U-box 14 52 - -
Ahy15g0384 245 SMART ringv_2 12 51 IPR011016 GO:0008270
Ahy15g0384 245 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 6 53 IPR013083 -
Ahy15g0384 245 Pfam RING-variant domain 16 50 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0384 Ahy-Chr15 4453501 4458023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g0384 5 210 C3H Transcription Factor Family AT5G08750 69.626 2.98e-95 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0384 - - adu:107487456 491.115