Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0332 ATGGATCACAGAACAGAGGAAGAAAGAGAACAACAAAATTTGGGAGAAGAAGCAGTGCATGACGAGAAGAGGAGAAAGCAGAAGATAACAATAAGGTTGGTTTATGCTGATGGATCAAGTAGATGGAATTCGTCTTCGAGTTGTACTGCTTTGTCTTACTGTTGTCAAGCAGATGAATGCCTAGCAGACTTGCAGGCTGCTAAGAGGTACAATCGCCGTCACAAGGTTTGCGAGCGACATGCTAAAGCTCCGGTTGTCTTAGTTTCTGGCACTCGGCAAAGATTCTGCCAACAGTGTAGCAAATTTCATGAGCTAGCCCTGTTTGATGACAACAAAAGGAGCTGCAGAGAAAGATTGGCCAGTCACAATGAGCGTAGAAGAAAAGCTCAAGCTCATCATGCAGACCTTCAATCCCAACCAGAGAGCGATATTAATTAA 438 0.4406 MDHRTEEEREQQNLGEEAVHDEKRRKQKITIRLVYADGSSRWNSSSSCTALSYCCQADECLADLQAAKRYNRRHKVCERHAKAPVVLVSGTRQRFCQQCSKFHELALFDDNKRSCRERLASHNERRRKAQAHHADLQSQPESDIN* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0332 145 SUPERFAMILY SBT domain 53 133 IPR036893 GO:0003677|GO:0005634
Ahy15g0332 145 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 6 140 IPR044817 GO:0003677
Ahy15g0332 145 MobiDBLite consensus disorder prediction 121 145 - -
Ahy15g0332 145 Pfam SBP domain 55 128 IPR004333 GO:0003677
Ahy15g0332 145 PANTHER - 6 140 - -
Ahy15g0332 145 ProSiteProfiles Zinc finger SBP-type profile. 52 129 IPR004333 GO:0003677
Ahy15g0332 145 MobiDBLite consensus disorder prediction 1 23 - -
Ahy15g0332 145 Coils Coil 119 139 - -
Ahy15g0332 145 Gene3D - 51 116 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0332 Ahy-Chr15 3993384 3994352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g0332 55 145 SBP-box Gene Family AT1G53160 58.242 1.59e-32 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Ahy15g0332 SBP 8.10E-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0332 - - zju:107424290 141.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g0332 15 3993384 3994352 Ahy15g0332 15 3993384 3994352 ECH