Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0210 ATGGATAACGATGGTGGTGGTGGCCAAGGTAATCCATTATCTAACAACATTGTTGTGTTACTTCTTGCAATGGGTTCAGCTGCTTTTGTTGTCTCAATTTACCATCTCATAGCAATTTGTTTTTGCAATAACCGGCAAAATTCAAATAATAATGAGCAAAATCTACATCAACAAGATGGTGGTGAACCAAGCACTTCTACTTCTGTGGCGCATTTGATTCCGTCGCATAAGTATCACAAGAAAAAGGTTAATGAGAACAGCGAGGCCGACGATCAAGGTGGCGGCAGTGGCGGTACTTGTGCCGTGTGTTTGGGAGATTTTGAAGAGGATGAGGAGTTGAAGACTTTGCCGGAGTGCATGCACTCTTTTCACGTGCCATGCATTGATATGTGGCTCTATTCTCATACAAGTTGTCCCGTTTGCCGCGCCACCGCCACGCCGTCGCCGGTGGGGCTCAACCATGGCCCTTTAAATGTTTTTGGTGATGATAGTGGTTATGGCTTGAATAATAATAATAATGCACGCCAAGGCATTGATATGGTGCAAATTGCTGTTGTCCAAAGTGGTTTTGTTCGAAGGTGA 582 0.445 MDNDGGGGQGNPLSNNIVVLLLAMGSAAFVVSIYHLIAICFCNNRQNSNNNEQNLHQQDGGEPSTSTSVAHLIPSHKYHKKKVNENSEADDQGGGSGGTCAVCLGDFEEDEELKTLPECMHSFHVPCIDMWLYSHTSCPVCRATATPSPVGLNHGPLNVFGDDSGYGLNNNNNARQGIDMVQIAVVQSGFVRR* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0210 193 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 68 148 IPR013083 -
Ahy15g0210 193 ProSiteProfiles Zinc finger RING-type profile. 100 142 IPR001841 -
Ahy15g0210 193 PANTHER CHROMATIN REGULATOR PHD FAMILY-RELATED 10 193 - -
Ahy15g0210 193 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 10 193 IPR044675 -
Ahy15g0210 193 SUPERFAMILY RING/U-box 78 148 - -
Ahy15g0210 193 SMART ring_2 100 141 IPR001841 -
Ahy15g0210 193 Pfam Ring finger domain 99 142 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0210 Ahy-Chr15 2409888 2410972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g0210 18 190 C3H Transcription Factor Family AT5G17600 32.597 3.10e-22 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0210 - - aip:107639941 372.859