Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0102 ATGGGAAGGTCACCATGCTGTGATGAGAGTAGCGGTAATGTAAAGAAAGGGCCATGGACACCAGAAGAGGATGAGAAGCTGATTGATTACATAAAGAAACACGGTCATGGAAGTTGGAGAACTCTTTCAAAGCGTGCTGGTCTCAACAGATGCGGTAAGAGCTGCCGACTCAGGTGGGCTAACTACCTTCGTCCCGATATCAAGAGAGGCAAATTCACCCCAGACGAGGAGAGGATCATCGTCAACCTTCATTCTCTTCTTGGAAACAAGTGGTCAAAGATTGCAAGCCATCTTCCGGGAAGAACTGATAATGAGATAAAGAATTTCTGGAACACTCACATAAGGAAGAAGCTTCTGCAGATGGGTATTGATCCAGACACACACAAGCCAAGGACTGATTTCAATCACCTCATCAATCTCACACACTTGCTTGCAGCAGCCATCTCCTCCAATTCAGGGAATCCTATGATGAATATGAACACTCCTACTTGGGGGAGAAACCCTAATATTGCTCTACAAGGAGATGTTACTTCTCAATTATCCCAACTACATCTGTTGCAAAATCTGTTGCAAATTATGAACAGCAACACATTTGTTAATCTGGGGAATAACCCTAATTTCCCCTTAGGAAACCCCAGCTTCAATAATTCTTATCTTAACGGGTCAAACATCCTTCAAACTGTAGAACCTTTTGCTGGATTGAAAAGTGAAGAATATGGATCACAATCAAACCCTACTACTGGTCTATTATCTCAATCAGACTACAGTAGTGACTTCTTTCAACATGGATTGTCAACAAATACACAAGAGCTTGAATGCTATAACAAACTCAGCAACACTACTAATCAAGCAGAGATTAATCCACTGTTTCCTGCATTAGTAGCATCCTCTCCAGTAATTACTGATGGAACCTGCAGCAGCTTCAACCAGATGGAGAATAAGAATAGTAGCTGTTGCAACACAGCTCCAACATCCACAGCACAGTCACCTAATAATAATTCCAACACAATCTTTGATGATTTGGAGAAGCTCCTTCAGGATGATGAAACATCTGCCTCCTACTGGAAAGATATTCTAGACTTGACATCAATATGTGCCTCAGAGAATTCGTGGTAG 1116 0.4194 MGRSPCCDESSGNVKKGPWTPEEDEKLIDYIKKHGHGSWRTLSKRAGLNRCGKSCRLRWANYLRPDIKRGKFTPDEERIIVNLHSLLGNKWSKIASHLPGRTDNEIKNFWNTHIRKKLLQMGIDPDTHKPRTDFNHLINLTHLLAAAISSNSGNPMMNMNTPTWGRNPNIALQGDVTSQLSQLHLLQNLLQIMNSNTFVNLGNNPNFPLGNPSFNNSYLNGSNILQTVEPFAGLKSEEYGSQSNPTTGLLSQSDYSSDFFQHGLSTNTQELECYNKLSNTTNQAEINPLFPALVASSPVITDGTCSSFNQMENKNSSCCNTAPTSTAQSPNNNSNTIFDDLEKLLQDDETSASYWKDILDLTSICASENSW* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0102 371 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Ahy15g0102 371 Gene3D - 71 118 - -
Ahy15g0102 371 PANTHER MYB TRANSCRIPTION FACTOR 1 362 - -
Ahy15g0102 371 Gene3D - 15 68 - -
Ahy15g0102 371 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Ahy15g0102 371 Pfam Myb-like DNA-binding domain 69 113 IPR001005 -
Ahy15g0102 371 CDD SANT 71 114 IPR001005 -
Ahy15g0102 371 CDD SANT 18 63 IPR001005 -
Ahy15g0102 371 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Ahy15g0102 371 SMART sant 68 116 IPR001005 -
Ahy15g0102 371 SMART sant 15 65 IPR001005 -
Ahy15g0102 371 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 63 IPR017930 -
Ahy15g0102 371 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 362 - -
Ahy15g0102 371 SUPERFAMILY Homeodomain-like 13 110 IPR009057 -
Ahy15g0102 371 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0102 Ahy-Chr15 1178081 1180158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g0102 1 360 MYB Transcription Factor Family AT5G16770 43.669 9.46e-84 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy15g0102 Myb_DNA-binding 5.20E-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0102 K09422 - gmx:100810159 390.963