Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g3413 ATGCGGATGAGCTGTAATGGATGCAGGGTGCTGAGGAAAGGGTGTAGCGAGAATTGCAGCATAAGGCCATGTCTTCAGTGGATAAAGAGCCCAGAGTCACAAGCCAATGCCACCGTCTTCCTGGCCAAGTTCTACGGCCGCGCCGGCCTCATGAACCTCGTCAACGCTGGCCCCGAACACCTTCGTCCAGCCATTTTTCGGTCCTTGCTGTACGAGGCATGCGGGAGGATAGTCAACCCAATCTACGGTTCCGTGGGCCTATTGTGGTCGGGCAGCTGGCAGCTCTGCCAGGCGGCAGTTGAAGCCGTCTTGAAAGGCGCGCCAATCACTCCCATCACCTCCGAAGCTGCCGCCAACGGCCGGGGCCCACCACTCAAAGCATACGACATACGCCACGTCACCAAGGACGACTCTAACTCCGCCCTCTCCACTCACAACCCCAGCCACCCACTCAAGACTCGCTCACGCAAGCGATCACACTCCCAGCCCAAGCCCAAGACCAAGCCCAACGCCCAGAAATTAACGACCACCGCCACTACAACTACCACCGCGTTGCTGAACGTTGACGAGGTCGTCAACCATTCCGCCAGTCTGGATCACGAGTCGTCGCTGAGTCACCAGTCCGAGTTGGTCACCGCCGCGGAAGGAGGAGGAGAGAGCAAAGAGAGAGAGAGTGAGAGCATCGTGTCGGTCGAGACTACCGCCGAGGCTGCTTCGGTTCTTTTCCGTGACGAGCCGGAGTCCAACCGGAAGCGCGTTGAGCGAACCGATGAGGACCGAAGCGGGCTTGGTCTAGACCTTACGCTTGGGTTCGAACCGGTTTCTTCTTCGGCACGTGCGGATCAGGTGGTTCCCGTTAAGAAGAGGAGGTTCGATTTGAAGGATTATGGTGAGATGGGGCTTGGGCTTGAATGCCCGGCTTGA 924 0.5844 MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLVNAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPITSEAAANGRGPPLKAYDIRHVTKDDSNSALSTHNPSHPLKTRSRKRSHSQPKPKTKPNAQKLTTTATTTTTALLNVDEVVNHSASLDHESSLSHQSELVTAAEGGGESKERESESIVSVETTAEAASVLFRDEPESNRKRVERTDEDRSGLGLDLTLGFEPVSSSARADQVVPVKKRRFDLKDYGEMGLGLECPA* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g3413 307 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 1 288 - -
Ahy14g3413 307 MobiDBLite consensus disorder prediction 244 262 - -
Ahy14g3413 307 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 288 - -
Ahy14g3413 307 MobiDBLite consensus disorder prediction 136 177 - -
Ahy14g3413 307 MobiDBLite consensus disorder prediction 244 265 - -
Ahy14g3413 307 PIRSF AS2 1 298 IPR017414 -
Ahy14g3413 307 MobiDBLite consensus disorder prediction 150 164 - -
Ahy14g3413 307 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Ahy14g3413 307 MobiDBLite consensus disorder prediction 198 226 - -
Ahy14g3413 307 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g3413 Ahy-Chr14 142681267 142682838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g3413 1 293 AS2 family AT3G02550 57.823 2.79e-103 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy14g3413 LOB 1.60E-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g3413 - - lja:Lj1g3v3317390.1 389.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g3413 14 142681267 142682838 Ahy14g3413 14 142681267 142682838 ECH
Ahy19g3166 19 154731294 154732722 Ahy14g3413 14 142681267 142682838 ECH
Ahy14g3413 14 142681267 142682838 Ahy4g3047 4 128245737 128247308 hybridization