Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy14g3358 | ATGGATCCACAACTCACACCCCAAACCCTAAACTCCACCAGTTTATTCCTTGCCGCCACAACAGCCACCACTCATTCCGAACAACCACCACATTCACTCTCCCTCACCACCGTTCCTTCCACCGTACCACGCTCCAAGCTCATCCCGAACACTCGCTTCCTCGTCGACGCCTTCCGCCACGCCGACACAGCATTCTCCGTCTCCTACTTCCTCTCTCACTTCCACTCCGATCACTACACCGGTCTCTCCCATTCTTGGTCCCGCGGCATTGTCTTCTGCTCCGCCACCACCGCCTCCCTCCTCCAACGAATCCTCGGAGTCCCCAAACGCTTCCTTGTACCCCTTCCCCTTTGCCAGCCCGTTGAAATCGACGGCGCGGAGGTCACGCTGGTCGACGCGAACCACTGCCCTGGCGCGGTCCAGTTCCTATTCAAGGTCCCAACAAAAGAAGAAGGGAAGAAATTCGAGAGGTATGTTCACACTGGCGATTTCAGGTTTTGTAATTCAATGATTTTGGAGCCTGCAATTCTTGATTTCGTTGGCTGTGATGCTGTGTTCTTGGATACTACTTATTGCAACCCAAAGTTTGTGTTTCCTTCGCAAGAGGAGAGTGTTGATTATGTGGTTAGTGTAGTCGAGAGGGTTATTAGTGATTGTGGTGGTGATGGTAGTGGTGTTTTGTTTCTTGTTGCTACTTATGTTATTGGGAAGGAAAAGATTTTGGTTGAACTTGCACGGAGAGTGAAGAGGAAGGTGCATGTGGATGCTAGGAAAATGGAGGTTTTGAGGGTGCTTGGGTATGGAGAGAGTGGTGTGTTTACCGAGGACAGTTCAGAGAGTAATATTCATGTTGTTGGCTGGAATGTATTGGGGGAGACATGGCCGTATTTTAAGCCAAATTTCGTTAGGATGAAGGAGATTATGATTGAGAGAGGGTACTCCAAGGTTGTGGGATTTGTGCCAACCGGATGGACTTATGAAGTAAAGGGCAATACGTTCGCAGTGAGGTCCAAGGATTCATTTGAGATTCATCTCGTGCCGTATAGCGAGCATTCCAACTACGAGGAGCTCAGGGAGTATGTGAAGTTTTTGAAGCCAAGGGGTGTTGTTCCGACAGTGGGTTTGGATGTTGAGAAAAGCGACAGTAAGCATGCTGAAAAAATGAGGAAGTATTTTGCTGGATTGGTTGATGAGACGGCCAACAAGCATGAATTTCTAAAGGGATTTCACCGTGCCACAGGCGACACAGATTTCTTGGTTGAGAAGGATGTTAATGATGGTCAGAAGCCAGGAAAAAACATGGAGGAAGGAATCAAGCCATCTGAGTTGGATGGTGAGGAAAGTACAACTCCGTATGTTGCTGCTAGTGTGCCCTCTTCTACTGGGGAACCGTGTACAGAAAGTGTTACTTTACTAACTGATGAAGAAAAAGAGAAAATGATTGAAGAACTTGGTAATTGTTTGCCGGCATGGGTCACTCGAAGCCAAATGTTAGAGCTGATCAGCATCTCAGGGAGCAATGTTGTTGAAGCTGCTTCTAATTTTTATGAACGTGAAACTGAATTTCACAAGCAAGCATTTTCTTGTCAAACTTCTTCGGTGTCCAAGTGCAGCTCACTAAATGACATAGATTCTCCTTCAAAAGCTTGCCTGAATTCGAGCAGCACTACCAAAAATAACGATGTTTTTCCAAGCCAGGACTCTACTAAACTAACTATCTTGAAGCATACAGTTTTAAGTCAAGCTTCCTCTGCCAAAAGGAATAAAATTAGTGGAAGTAAGCCAAACAAGAAAGTAAAAGTCAAAGCAAAGTCACAGTCACAATCAAGTGATCCAAAGCAGTCCACCATAACAAAATTCTTCAGCAAAGTATTGCCTGTGAAGCCTAGTGTTGCTCAGTCTGATCGTTCTGAATTGATGATTGGCGTAAGCCCTAAAGTTGAAAATATGTTGCCAGATGATGTTGGAAATCGGTACAAGGATGAGATTGATCAGTTTATGCAAATAATAAATGGGAAAGAGTCATTAAAAGATCATGCCATAACTATAATTGAGAAGGCAAAAGGAGATGTAAATAAGGCATTGGATATATATTACTGTAATTCTGGAAATCTTGGTGAAAAGGAAATTTCAGTTCAAGCAGAGTGTAAAATTGATAGCTCTTTAGAGAAGAATTGTGTGTTACATGAATTGAAAGGCATTCCTGATACCACCGTGAAGAGAATTCATGTAACTCTACCACTTGAGAAATACAATCCTAAAGAGCATGCTTGTTGGAAAGATGGGCAGCCTGCACCATATTTACATCTTGCACGAACCTTCAGCCTTCTGGAGGATGAGAAAGGAAAGATTAAGGCTACTTCAATGTTATGCAATACATTCCGAAGTTTGCTGGCCCTGTCTCCAGCAGATGTGCTGCCTGCTGTGTACCTATGTACAAACAAAATTGCAGCAGACCATGAAAAGATGGAACTAAACATTGGTGGAAGTATAGTTACTGCAGCACTTGAAGAGGCATGCGGAACAAATCGATCCAAAATAAGGGAGATGTATAACAAATTTGGCGATCTTGGTGATGTTGCTCAAGAGTGTCGTCAAACACAGAGATTGCTTGCACCACCAACACCACTTCTGATTAAGGATGTTTTCTCTGCACTGCAAAAGATAAGTTTACAAACAGGCCATGGAAGCACATCTCGGAAGAAAGACATTATCATTCGTCTCATGTGTTCCTGTCGTGAGAAGGAGATTAAATTTCTTGTTCGGACCTTGGTCAGGAACTTAAGGATTGGGGCAATGCTTAAAACTGTTTTACCTGCCTTGGCTCAAGCTGTTGTTATGAATTCTTTCCCTACAGTACAACAAGAAGGAACTGCAGAGAATTTGAAGGAGAAGTTTCAGGTCCTTTCTGTGGAAATTGTTGAAGCATATAACATAATTCCGAATTTGGATCTCATAGTTCCATCTCTCATGAACAAAGGAATTGATTTTTCGGTTTCAAGTTTGTCAATGGTTCCTGGAATTCCTATTAAGCCTATGCTTGCAACGATCACCAATGGCATTCCCAAGGCATTGAACCTATTTCAAAATAAGGCATTTACTTGTGAATATAAGTATGATGGTCAGCGAGCTCAAATTCACAGATTAATTGATGGATCAATTCGTGTTTTTTCAAGAAATGGAGATGAATCAACATCAAGATTTCCTGATCTTATTGACATAATTAAGGAATCCTGCAAGCCTGTTGCTTCGACTTTCATAATTGATGCTGAAGTTGTTGGTATTGATAGAAAAAATGGATTTAGGATTATGTCTTTCCAGGAGCTATCTTCACGTGGTAAAGGAAGCAAAGATACTCTAGTTACTACAGAGAGCATAAAGGTGGATATTTGCATATTTGTCTTTGATATCATGTTTGCAAATGGAGAGCAGCTATTGGGTTTTCCTCTTCGCACAAGACGGAAATATCTAAAGGATTTGTTATGTGATGAAAAACCAGGGTATTTTGAATATGCAAAGGAAATAACAATTGAAGCAGACAAGGCTTGCGAAACTTGTAAAGACACATTAACCAAGATAAACGCTTTCTTGGAAGATGCTCTTCGTTCTTCCTGTGAAGGAATTATGGTGAAAACATTGGATGTAGATGCTGGTTATTCTCCGTCAAAGCGTTCTGATAAATGGTTAAAGGTCAAACGAGATTATGTCGATGGTTTAAATGATACTCTTGATTTGGTGCCAATTGGAGCTTGGCATGGAAATGGAAGGAAGGCCGGATGGTATAGTCCATTTCTCATGGCATGTTATAATCCTGAAACTGAGGAATATCAAAGCGTGTGCCGAGTGATGTCTGGGTTCTCAGATTCGTTTTACATAGAGATGAAAGAATTCTTCTCTGGGGACAAAGTCTTATCCAAAAAGCCGCTGTATTATCGAACAGCAGAGAAGCCCGACATGTGGTTTTGTCCGCAACTTGTTTGGGAGATACGAGGTGCAGAGTTCACGGTGTCCCCTGTTCATCATGCAGCCATCGGTTTAATTCATCTGTCTCGGGGCATCTCAATACGGTTTCCGAGATTTATTAGGCGTGTGTCGGATAGGAACCCAGAAGAGTGTAGTACAGCAGCAGATATTGTTAATTTGTTTCATTCTCAGCCAAGGAAGAAGGATGTCACAGCTGAAGATTGA | 4188 | 0.4248 | MDPQLTPQTLNSTSLFLAATTATTHSEQPPHSLSLTTVPSTVPRSKLIPNTRFLVDAFRHADTAFSVSYFLSHFHSDHYTGLSHSWSRGIVFCSATTASLLQRILGVPKRFLVPLPLCQPVEIDGAEVTLVDANHCPGAVQFLFKVPTKEEGKKFERYVHTGDFRFCNSMILEPAILDFVGCDAVFLDTTYCNPKFVFPSQEESVDYVVSVVERVISDCGGDGSGVLFLVATYVIGKEKILVELARRVKRKVHVDARKMEVLRVLGYGESGVFTEDSSESNIHVVGWNVLGETWPYFKPNFVRMKEIMIERGYSKVVGFVPTGWTYEVKGNTFAVRSKDSFEIHLVPYSEHSNYEELREYVKFLKPRGVVPTVGLDVEKSDSKHAEKMRKYFAGLVDETANKHEFLKGFHRATGDTDFLVEKDVNDGQKPGKNMEEGIKPSELDGEESTTPYVAASVPSSTGEPCTESVTLLTDEEKEKMIEELGNCLPAWVTRSQMLELISISGSNVVEAASNFYERETEFHKQAFSCQTSSVSKCSSLNDIDSPSKACLNSSSTTKNNDVFPSQDSTKLTILKHTVLSQASSAKRNKISGSKPNKKVKVKAKSQSQSSDPKQSTITKFFSKVLPVKPSVAQSDRSELMIGVSPKVENMLPDDVGNRYKDEIDQFMQIINGKESLKDHAITIIEKAKGDVNKALDIYYCNSGNLGEKEISVQAECKIDSSLEKNCVLHELKGIPDTTVKRIHVTLPLEKYNPKEHACWKDGQPAPYLHLARTFSLLEDEKGKIKATSMLCNTFRSLLALSPADVLPAVYLCTNKIAADHEKMELNIGGSIVTAALEEACGTNRSKIREMYNKFGDLGDVAQECRQTQRLLAPPTPLLIKDVFSALQKISLQTGHGSTSRKKDIIIRLMCSCREKEIKFLVRTLVRNLRIGAMLKTVLPALAQAVVMNSFPTVQQEGTAENLKEKFQVLSVEIVEAYNIIPNLDLIVPSLMNKGIDFSVSSLSMVPGIPIKPMLATITNGIPKALNLFQNKAFTCEYKYDGQRAQIHRLIDGSIRVFSRNGDESTSRFPDLIDIIKESCKPVASTFIIDAEVVGIDRKNGFRIMSFQELSSRGKGSKDTLVTTESIKVDICIFVFDIMFANGEQLLGFPLRTRRKYLKDLLCDEKPGYFEYAKEITIEADKACETCKDTLTKINAFLEDALRSSCEGIMVKTLDVDAGYSPSKRSDKWLKVKRDYVDGLNDTLDLVPIGAWHGNGRKAGWYSPFLMACYNPETEEYQSVCRVMSGFSDSFYIEMKEFFSGDKVLSKKPLYYRTAEKPDMWFCPQLVWEIRGAEFTVSPVHHAAIGLIHLSRGISIRFPRFIRRVSDRNPEECSTAADIVNLFHSQPRKKDVTAED* | 1396 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy14g3358 | 1395 | Gene3D | - | 197 | 351 | - | - | |
| Ahy14g3358 | 1395 | PANTHER | DNA LIGASE | 7 | 713 | - | - | |
| Ahy14g3358 | 1395 | CDD | Adenylation_DNA_ligase_I_Euk | 1003 | 1235 | - | - | |
| Ahy14g3358 | 1395 | Gene3D | DNA ligase/mRNA capping enzyme | 1041 | 1172 | - | - | |
| Ahy14g3358 | 1395 | Pfam | DNA repair metallo-beta-lactamase | 271 | 374 | IPR011084 | - | |
| Ahy14g3358 | 1395 | SUPERFAMILY | Metallo-hydrolase/oxidoreductase | 49 | 374 | IPR036866 | - | |
| Ahy14g3358 | 1395 | CDD | OBF_DNA_ligase_I | 1241 | 1384 | - | - | |
| Ahy14g3358 | 1395 | PANTHER | DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED | 7 | 713 | - | - | |
| Ahy14g3358 | 1395 | MobiDBLite | consensus disorder prediction | 425 | 466 | - | - | |
| Ahy14g3358 | 1395 | Gene3D | - | 1237 | 1394 | IPR012340 | - |
Showing 1 to 10 of 26 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ahy14g3358 | - | - | aip:107635689 | 2672.89 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Ahy14g3358 | 14 | 142231136 | 142239353 | Ahy14g3358 | 14 | 142231136 | 142239353 | ECH | |
| Ahy14g3358 | 14 | 142231136 | 142239353 | Ahy4g2993 | 4 | 127795606 | 127803823 | hybridization |
Showing 1 to 2 of 2 entries