Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g3356 ATGGCGCTGCAGAACATTGGTGCCGCAAATAGCGATGATGCCTTCTACAGGTATAAGATGCCTAAAATGATAACCAAGATTGAGGGCAGAGGTAATGGCATCAAAACCAATATTGTCAATATGGTTGACATTGCAAAAGCGTTGGCTAGGCCGGCATCTTACACCACCAAATATTTCGGTTGTGAGCTTGGAGCACAATCGAAATTCGATGAGAAAACCGGCACTTCTCATGTTAATGGAGCACATGATACTGCAAAACTTGCGGGCCTTCTTGAGAACTTCATTAAGAAATATGTTCAATGCTACGGTTGTGGAAATCCTGAAACTGATATTTTGATTACAAAGAGTCAAATGATCCAGCTGAAATGTGCTGCTTGTGGTTTTGTGTCTGATGTGGACATGAGGGACAAGCTGACTACCTTTATCATCAAGAACCCTCCTGAAGCAAAGAAAGGATCGAAAGACAAAAAGGCCATGAGGAGAGCTGAGAAGGAGAGGATGAAGGAAGGTGAAATGGCTGATGAGGAACAGAAGAAACTGAAGAAAGAGGTTAAGAAGAAAGGCTCTTCATCATCAAAGGATGGCACTGTAAAATCTAGTAAGAAGAAAGCAGGTAGCTCTGATGAGGAACGTGTATCTCCTACACACAGTCAAATTGATGAGAAAGAGGAGGCTCGTGATGAAGATGATGGTGATGATGATGTTCAGTGGCAAACGGATACATCTATTGATGCTGCTCGTCAACGTATTCAAGAACAGTTAAGTGCTGTGACTGCTGATATGGTCATGCTCTCGACAAATGAACCAGAGAAGAAGAAGACAGAAAGCAAGGGTTCTGAGAATGGTGACACTGTGAACTATGCAACTGTGGTCAGGGAAGTGAAAGCATATTTGAAGAAAGGTGTCGCAGCGAAGGAATTGCAGTCACATATTGCTGCATTTCCTGTATCTGCTCAGGAGAAGATGAATGCACTTCTTGAAGGATTATTTGATGGTGTTGAGAAAGGGTTTGGAAAAGAAGCTACCAAGAGGAAGAATCACCTTGCTGCTGCAGTTGCTGGAGATGACGAGGGATTGCAGCTGTTATTGCTCAATGCTGTTGAGGAGTTCTGTAACAAGAAAGGTAGCAATGCATTGAAGGAGGTTGCACTTATTCTGAAAGCCCTCTATGATGTTGATTTGGTGGAGGAAGAGCACGTCGTGCATTGGTATTCAAAGGGACTGAAGGGTGATAAGAAGGACTCTCAGATATGGAAGAATGCTCAACCATTCATTGATTGGCTTCAGAATGCTGAATCAGAATCGGAGGAAGAATGA 1317 0.4305 MALQNIGAANSDDAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSHVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETDILITKSQMIQLKCAACGFVSDVDMRDKLTTFIIKNPPEAKKGSKDKKAMRRAEKERMKEGEMADEEQKKLKKEVKKKGSSSSKDGTVKSSKKKAGSSDEERVSPTHSQIDEKEEARDEDDGDDDVQWQTDTSIDAARQRIQEQLSAVTADMVMLSTNEPEKKKTESKGSENGDTVNYATVVREVKAYLKKGVAAKELQSHIAAFPVSAQEKMNALLEGLFDGVEKGFGKEATKRKNHLAAAVAGDDEGLQLLLLNAVEEFCNKKGSNALKEVALILKALYDVDLVEEEHVVHWYSKGLKGDKKDSQIWKNAQPFIDWLQNAESESEEE* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g3356 438 MobiDBLite consensus disorder prediction 148 223 - -
Ahy14g3356 438 Gene3D - 2 104 - -
Ahy14g3356 438 SMART 542_3 345 434 IPR003307 GO:0005515
Ahy14g3356 438 Gene3D - 105 145 - -
Ahy14g3356 438 SUPERFAMILY ARM repeat 286 432 IPR016024 -
Ahy14g3356 438 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743|GO:0006413
Ahy14g3356 438 Coils Coil 159 179 - -
Ahy14g3356 438 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
Ahy14g3356 438 Coils Coil 433 438 - -
Ahy14g3356 438 ProSiteProfiles W2 domain profile. 277 438 IPR003307 GO:0005515
Ahy14g3356 438 CDD W2_eIF5 290 436 - -
Ahy14g3356 438 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743|GO:0006413
Ahy14g3356 438 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 438 IPR045196 GO:0003743|GO:0006413
Ahy14g3356 438 MobiDBLite consensus disorder prediction 146 236 - -
Ahy14g3356 438 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-LIKE 1 438 - -
Ahy14g3356 438 Pfam eIF4-gamma/eIF5/eIF2-epsilon 360 438 IPR003307 GO:0005515
Ahy14g3356 438 Gene3D - 280 438 - -
Ahy14g3356 438 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 11 101 IPR016189 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g3356 Ahy-Chr14 142219181 142222088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g3356 1 431 Eukaryotic Initiation Factors Gene Family AT1G77840 62.500 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g3356 K03262 - gmx:100777906 659.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g3356 14 142219181 142222088 Ahy14g3356 14 142219181 142222088 ECH
Ahy14g3356 14 142219181 142222088 Ahy4g2991 4 127783651 127786558 hybridization