LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy14g3337	ATGACTCGTGTGAAGTTTGAGGAACTCAACAAAGACTTGTTTGAGAAGTGCATGGAGATTGCTCAGAAGTGTCTTGATGATGCCAAGATGGCCAAGAGTGATGTACATGATGTTGTCCTTGTTGGTGGATCTTCAAGAATTCCAAAAGTGCAGAGTTTATTGCAGGGTTTCTTTGAGGGAAAGGATCTTTGCAATAGTATCAACCCGGATGAAGCAGTTGCTTATGGTGCTGCAGTTCAAGCTGCATTGTTGAGTGAAGAATATAGCATTGTCCCAAACTTGGTTCTGGTGGATGTCACTCCTCTGTCTCTTGGCATAGCCACAAAAGGAGATTTAATGAGTGTAGTGATCCCCAAGAATACTGTAATTCCTGTAAAGATGGGTGCTGTTTTTGCCACAATTGAAGATAATCAATCCACTGCTTCATTCCCTGTGTATGAAGGAGAAAGGACAAAAGCCAAGGAAAATAATTTGCTTGGTAAGTTTAAGCTTTCGGGGCTTCCACTTGCTCCTCGAGGTTATCCTATGAATGTTAGCTTTGAACTTGATTTTGATGGTATCTTAAAGGTTAGTGCTGAGGATGAAACAACTGGTTCCAAGAATGGAATCACCATTACTAATGAGAAGGGAAGACTCTCAAGTGCTGAAATTAAGAGAATGATTGAGGAAGCTGCATTGTTCAGGGAAGAGGATAAGAAGTTCAAGAAGATGGTGGAAGCAAAGAATGCTTTGGATGAATATATTTACAGGATGGAGAAAGCTATGAAGGATTCTGATGTAAGCTCGAAGGTTTCGCCTTCTGAAAAGCAGAGAATCATGGCTTCATTAAGAGAGGGAAAAAGATTGCTCCGGAGTGAGGAGCAGCACACTGAAGCTTCTGTGTTTGAGGACTTCATTAAGAAGTTACAGAAGATTTGTCAAGTGATAGTGATCAACAAGGTCCGTGAATACAGTGATGAAGATAGTGATTCTGATGATTGTTACTAA	987	0.4073	MTRVKFEELNKDLFEKCMEIAQKCLDDAKMAKSDVHDVVLVGGSSRIPKVQSLLQGFFEGKDLCNSINPDEAVAYGAAVQAALLSEEYSIVPNLVLVDVTPLSLGIATKGDLMSVVIPKNTVIPVKMGAVFATIEDNQSTASFPVYEGERTKAKENNLLGKFKLSGLPLAPRGYPMNVSFELDFDGILKVSAEDETTGSKNGITITNEKGRLSSAEIKRMIEEAALFREEDKKFKKMVEAKNALDEYIYRMEKAMKDSDVSSKVSPSEKQRIMASLREGKRLLRSEEQHTEASVFEDFIKKLQKICQVIVINKVREYSDEDSDSDDCY*	329

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy14g3337	328	SUPERFAMILY	Heat shock protein 70kD (HSP70), peptide-binding domain	92	245	IPR029047	-
	Ahy14g3337	328	SUPERFAMILY	Heat shock protein 70kD (HSP70), C-terminal subdomain	239	311	IPR029048	-
	Ahy14g3337	328	Pfam	Hsp70 protein	1	310	IPR013126	GO:0005524\|GO:0140662
	Ahy14g3337	328	Gene3D	-	65	82	-	-
	Ahy14g3337	328	Gene3D	Actin; Chain A, domain 4	1	16	-	-
	Ahy14g3337	328	Gene3D	Substrate Binding Domain Of DNAk; Chain A, domain 1	90	240	IPR029047	-
	Ahy14g3337	328	Gene3D	-	241	314	IPR029048	-
	Ahy14g3337	328	Coils	Coil	237	257	-	-
	Ahy14g3337	328	PRINTS	70kDa heat shock protein signature	67	87	-	-
	Ahy14g3337	328	PRINTS	70kDa heat shock protein signature	93	112	-	-
	Ahy14g3337	328	PRINTS	70kDa heat shock protein signature	35	51	-	-
	Ahy14g3337	328	PRINTS	70kDa heat shock protein signature	173	189	-	-
	Ahy14g3337	328	PANTHER	HEAT SHOCK PROTEIN 70KDA	1	313	IPR013126	GO:0005524\|GO:0140662
	Ahy14g3337	328	ProSitePatterns	Heat shock hsp70 proteins family signature 3.	38	52	IPR018181	-
	Ahy14g3337	328	Gene3D	-	17	64	-	-
	Ahy14g3337	328	PANTHER	HEAT SHOCK 70 KDA PROTEIN	1	313	-	-
	Ahy14g3337	328	SUPERFAMILY	Actin-like ATPase domain	1	84	IPR043129	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy14g3337	Ahy-Chr14	142056607	142057593	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy14g3337	1	310	Calmodulin-binding Proteins	AT3G12580	57.372	1.18e-118	354

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy14g3337	K03283		-	gmx:102667578	360.533