Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g3259 ATGGCCGACAATGGAGCAGCTTTGTCCTCGTCGTCGTCGTCATCATCCTTATCAGAAGGCATGTACGATGTTTTTCTGAGCTTTAGAGGCGAAGACACAAGATACATATCCTCAGATTCTCTCTACCGTAAACTCGCCGAAAACGGAAACCTCAAAGTGTTTAGAGATTGTCCGGGTCTGAAACTAAGTGACCCAATTAAATCTACTCTTGTGGAAGCCATTAAAGGATCAAGGATGTTCATTGTTATGATGAGTTCAAACTATGTGTCTTCCTCGTGGTGCCTCGTGGAGCTAGTGGAGATACTCAAGTACTCCAACAATGGAAGAAATCGCGCCGTTTTTCCAGTTTTTTACCACGTGGAGCCTTCAGAAGTTAGATATCAGAATAGCGTCAAATCTAAGGAAGCCATGAGAAAACATGAAGAGAGATACGGCAAAGATACTGTGGCAGCGTGGGAGTCGGCTCTATCTACAATTTGCGGGCTATGCGGACAACACATTGTTAAGAATAAAGGGTATGAAACTGAGGTCATTGACAAGATTGCTGAACAAGTCTTGGCAAAAAATCGAGAGATCAAGCAACTATTGAATAGATTTTATTCTCAATTTGAAGAAGTGGAATCACTTTTGGACCTTAAATCTCGTAATACTCTTCGTATGGTGGGTATTTACGAAGAAGATGCTGAAATAGACAAAACAACATTCACTTTGGAGCTATACTATAAGATCAAACATGAGTTCAAAGAGGCAAGTTTTCTTCTCGGTGTGAGTAAAACTTTAGAGGAAAGCGCTGATGGCCTGAAAAATCTCCAAAAGGCGATTCTTTCTGATATGGGTGTAAAGGTAAGCACTGTGGATTGCACATCTACCGGATCCTCGGAAATCAAGCGGAGGTTGCGCCATAAAAGAGTGCTTTTGGTTCTAAATGACGTTGATAGTAAAATGCATTTAGAGTTGCTGGCAAGAAGTGGTGATCTGTTTGGTCCTGGTAGTAGGATCATCATAACAACAGAGGACAAAGATCTCTTGGATAATTATCCTGTGATAGATGGTGTTGAGACTAAGACATATTGCATTCGTGAATGTGATGAATTCGAAGGCAACAAAAGCAGTAATCATGTTGTGAAGGGAGAATATGTAGTGGGATTGAAGAAAGATTTCAATGATGTGATTAAGCAACTCATGGAAGAAGATTCCCGTGATGGGAACATTGTTTCCATTGTTGGCATGGGTGGGATAGGGAAGACTACACTTGCTCGAAAGATCTACAATAGCGATGAGGTCAAGAAGCTATTCGCTTGCCGTGCATGGGCAACTATTTCCAAGGATTGCAGAGAGAAGGAGGTTTTTAAAAGTCTTCTCAACTGTCTGAAGTCATCCACCTCTAAACATGAAGATTCAAGTAGTGAAGAGGAGTTAATGCAGAAGGTGAGGAAATGTTTGACAGGGAAAAAGTACTTGATAGTCCTTGATGATATTTGGGACACTAAAGCATGGGCCACTCTAAAGGGTTGTTTCCCAGAAAACAACGATGGTGGCATGATACTAATAACAACTCGGAATGATCAGGTGGCCTACTTTTTAAGATCAAAGAAACCTCACCACAAGCTTTCCTTCATGGATAAAGAAGAAAGTTGGAAACTGTTTTGCAATGAAGTGTTTTGCAGAGAAAAATGTCCTCCCAAGCTAGAACGAATTGGTAGATCAATTGCCAACACTTGCAGCGGTTTACCACTGGCTATCAAAATCACAGCTGGGTTTGTAGCAAAAACGAAGAGATCAGGGGATGAATGGAAAAGAATCAAGAAACTACTCCCTCATTTGCGTATTGTTGAAGACAAGGAATGTAAGAAGATGAAGGAGAGATTGATGCTTAGCTACGATGATCTGCCTGAGAACATCAAGCCATGCTTCCTATATCTTGGAGTTTTTCCCGAAGATGATCAGATTTGTGCGCGAGACTTAATCCGTCTATGGATAACAGAGGGCCTCATAGAAGAGCCAATCCAAAGTGGAAGATCAAAAGCAACACCCGCAGAACTTGAAGATATTGGTGAGCAACACTTGAAGGAGCTAGTGGATCGTAACTTGGTACAAGTGTCTCAGAGAAGGAGTGATGACAAAGGCGTGAAAACATGTCAGATCCACGACCTCATCCGGGAACTGTGCATATCAGAGAGTAAGAACCCTGATAACAATAATAATAATGCTCGTAGGTTATCCTTTCCCAAGGATATAGGATCCTATGCATGTTTGGTAACATGTAGTCAATCACGCACTTGTTCCTTGTTCGTGTATGGAGATGCAGAGGGGTGGTCACATCATATTCCAAAAGGCTACCGAGTTATTGTGCTATATTTTAAAGGATCGAAGATGGATATAATTAGTGGAAAGAATGCTGGGTTTTTGAAGGGGTTGAAAAGCCTCAGGATCTTGAGAGTGGAATTTCCTGACCCATACCGGTTCTATCCGCTTCATCGTATGCACATATTACATATACTAGAACATTCTGCAGAGGACATAAATATTGAGGGGTTAAAGCAACTAAGACATCTCCGCAGTAGATATGCAGTGCACTTATTAGTTGATGAAGAAGGGGTAAAAGAAAAAATGCAGAATCTCCAAACCCTATGTTATGTGCATCTCGATTCACGACTAGAGTTCTTACTCGACAATGGCTACTTTCCCAACTTGAGAACACTGGGTTTACATTCAGCAGAAAGAAAGTTAAGTTGCTTACGCCGCTTGAGCAATCTACGTGAATTAAAACTTGAGCATATGACCTCTAAATATGTTCCATTAGATAAAAATGTATTTCCGTCAAATCTTACCAAGATTACCTTGTCATGGTATGTGGGTTTTAGCACCAAAGCCATGAATGCTTTGGGACAAATCCCCACCCTTCAAATTTTGAAATTATATGAAGTACAATGTATGGAAGGAATCCTTAATTGTGGTACTGAGAGGAGCTTTCCGCGGCTTCAAGTGTTTATCATGAAAAAGGTGCAGGTCAAAGGTCTTACATTAGAAGGAGGTGCAATGCCTTGCCTGCAACGTGCAGTCTTCCATGAGTGCCCTGGCTTGAAGTTGGAGTACCTTCCTGAACAAATGCGTTCCTCGGGTTGCAACTTGGAGTTTTCAGAACATGTTGAGCAACGGCGTTCTTGGGTTGTAAAAACTTGGAGTTTTCAGAACATGAACAAGAATAAGAAAGTGATGATGATACCGATAATGATGATGATGATGATGATGATACCGATGATGATGAAGATGATGATGATTGATTGA 3288 0.4115 MADNGAALSSSSSSSSLSEGMYDVFLSFRGEDTRYISSDSLYRKLAENGNLKVFRDCPGLKLSDPIKSTLVEAIKGSRMFIVMMSSNYVSSSWCLVELVEILKYSNNGRNRAVFPVFYHVEPSEVRYQNSVKSKEAMRKHEERYGKDTVAAWESALSTICGLCGQHIVKNKGYETEVIDKIAEQVLAKNREIKQLLNRFYSQFEEVESLLDLKSRNTLRMVGIYEEDAEIDKTTFTLELYYKIKHEFKEASFLLGVSKTLEESADGLKNLQKAILSDMGVKVSTVDCTSTGSSEIKRRLRHKRVLLVLNDVDSKMHLELLARSGDLFGPGSRIIITTEDKDLLDNYPVIDGVETKTYCIRECDEFEGNKSSNHVVKGEYVVGLKKDFNDVIKQLMEEDSRDGNIVSIVGMGGIGKTTLARKIYNSDEVKKLFACRAWATISKDCREKEVFKSLLNCLKSSTSKHEDSSSEEELMQKVRKCLTGKKYLIVLDDIWDTKAWATLKGCFPENNDGGMILITTRNDQVAYFLRSKKPHHKLSFMDKEESWKLFCNEVFCREKCPPKLERIGRSIANTCSGLPLAIKITAGFVAKTKRSGDEWKRIKKLLPHLRIVEDKECKKMKERLMLSYDDLPENIKPCFLYLGVFPEDDQICARDLIRLWITEGLIEEPIQSGRSKATPAELEDIGEQHLKELVDRNLVQVSQRRSDDKGVKTCQIHDLIRELCISESKNPDNNNNNARRLSFPKDIGSYACLVTCSQSRTCSLFVYGDAEGWSHHIPKGYRVIVLYFKGSKMDIISGKNAGFLKGLKSLRILRVEFPDPYRFYPLHRMHILHILEHSAEDINIEGLKQLRHLRSRYAVHLLVDEEGVKEKMQNLQTLCYVHLDSRLEFLLDNGYFPNLRTLGLHSAERKLSCLRRLSNLRELKLEHMTSKYVPLDKNVFPSNLTKITLSWYVGFSTKAMNALGQIPTLQILKLYEVQCMEGILNCGTERSFPRLQVFIMKKVQVKGLTLEGGAMPCLQRAVFHECPGLKLEYLPEQMRSSGCNLEFSEHVEQRRSWVVKTWSFQNMNKNKKVMMIPIMMMMMMMIPMMMKMMMID* 1096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g3259 1095 Gene3D - 540 631 IPR042197 -
Ahy14g3259 1095 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 158 IPR035897 -
Ahy14g3259 1095 ProSiteProfiles TIR domain profile. 20 189 IPR000157 GO:0007165
Ahy14g3259 1095 Coils Coil 178 198 - -
Ahy14g3259 1095 Gene3D - 365 532 IPR027417 -
Ahy14g3259 1095 SMART till_3 21 162 IPR000157 GO:0007165
Ahy14g3259 1095 Gene3D - 21 187 IPR035897 -
Ahy14g3259 1095 PANTHER - 374 1051 - -
Ahy14g3259 1095 PANTHER DISEASE RESISTANCE PROTEIN RP 374 1051 IPR044974 GO:0006952
Ahy14g3259 1095 Gene3D - 188 348 IPR027417 -
Ahy14g3259 1095 SUPERFAMILY L domain-like 706 1040 - -
Ahy14g3259 1095 Pfam NB-ARC domain 385 629 IPR002182 GO:0043531
Ahy14g3259 1095 Gene3D Ribonuclease Inhibitor 773 1076 IPR032675 -
Ahy14g3259 1095 PRINTS Disease resistance protein signature 404 419 - -
Ahy14g3259 1095 PRINTS Disease resistance protein signature 914 930 - -
Ahy14g3259 1095 PRINTS Disease resistance protein signature 480 494 - -
Ahy14g3259 1095 PRINTS Disease resistance protein signature 574 588 - -
Ahy14g3259 1095 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 232 359 IPR027417 -
Ahy14g3259 1095 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 375 641 IPR027417 -
Ahy14g3259 1095 Gene3D - 632 724 IPR036388 -
Ahy14g3259 1095 Pfam TIR domain 22 190 IPR000157 GO:0007165
Ahy14g3259 1095 ProSitePatterns Neurotransmitter-gated ion-channels signature. 637 651 IPR018000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g3259 Ahy-Chr14 141425781 141437709 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g3259 71 340 WRKY Transcription Factor Family AT4G12020 28.467 2.50e-19 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g3259 - - aip:110271380 1066.6