Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g3100 ATGTTGGACGAAGATACCAACACCAACACCACCTCCTGGGCGCCGCGCGTGTGCGACACCTGCCGCTCTGCCCCATGTGCGGTCTTCTGCCGCGCTGACTCCGCATACCTCTGCGCGTCATGCGACGCGCGCGTGCACGCCGCCAACACCTTGGCCTCACGCCACGAGCGCGTGTGGGTATGCGAGGCCTGCGAACGCGCCCCGGCAGCGTTTCTTTGTAAGGCGGATGCAGCATCGCTCTGTTCCTCCTGCGACGCTGACATCCACTCGGCTAACCCTCTGGCGAGTCGTCACCAGAGGGTGCCAATTGGACCCATGTACGGCCCACCATCCGTCCCAGTAAATGGCACGAATAGTGAGTTCGTTGGGATGGTTGAAGATGAAGAAGATGAAGATGATGACGAAGAAGAAGCTGCTTCTTGGTTGTTGTTGAACAACACCAACACCACGGCCGCCGTGACGGCCGGCACCAACAACAACCATAATAACAGTAACAGCAGCAACAACAACCAGAATCATCATCATCACCACCAACAACAGAGTAATCATAATGGTTTCTTGTTTGGTGGTGAGGTTGACGAGTATTTGGACCTTGTGGATTGTAATTCTTGTGGTGATGATGATAACAATCATCATCATCACAGCAACAATAACAATAACCACTTTGCGGTTGATGGTGTTGATCATCGTTATGGTTATCAGCAGCAGTATGGTGGTGGCGGTGGTCAGAAGAGCTATGGTGGTGGTGGCGGCGGAGATAGTGTGGTGCCGGTTCAGCATTTTCAACTTGGTTTGGAGTTTGAGCCTTCCAAAGCAGGCTACAATTACAATGCTTCTATTAGTCAAAGTGTATCAGTTTCATCAATGGAAGTTGGAGTAGTGCCAGAATCATCAATCAGCAATGGATCAATTTGCCATTCAAGACCACCAAAGGGAACAATTGACCTATTTTCAGGACCTACCCCAATGCAAATGAGTTCATATCTCACTCCAATGGACAGAGAAGCCAGAGTCCTAAGGTATAGAGAGAAGAAGAAGACAAGAAAATTCGAGAAGACCATAAGGTATGCATCAAGAAAGGCCTATGCAGAGACTCGGCCGCGAATCAAAGGCCGATTCGCCAAGAGAACTGATGTTGAAGCTGAAGTTGATCAGATGTTCTCCACACCATTGATTACAGAAGTTGGTTATGGCATTGTTCCTTCATTCTGA 1212 0.4967 MLDEDTNTNTTSWAPRVCDTCRSAPCAVFCRADSAYLCASCDARVHAANTLASRHERVWVCEACERAPAAFLCKADAASLCSSCDADIHSANPLASRHQRVPIGPMYGPPSVPVNGTNSEFVGMVEDEEDEDDDEEEAASWLLLNNTNTTAAVTAGTNNNHNNSNSSNNNQNHHHHHQQQSNHNGFLFGGEVDEYLDLVDCNSCGDDDNNHHHHSNNNNNHFAVDGVDHRYGYQQQYGGGGGQKSYGGGGGGDSVVPVQHFQLGLEFEPSKAGYNYNASISQSVSVSSMEVGVVPESSISNGSICHSRPPKGTIDLFSGPTPMQMSSYLTPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEAEVDQMFSTPLITEVGYGIVPSF* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g3100 403 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 13 403 IPR045281 GO:0009909
Ahy14g3100 403 ProSiteProfiles Zinc finger B-box type profile. 13 60 IPR000315 GO:0008270
Ahy14g3100 403 Pfam B-box zinc finger 58 103 IPR000315 GO:0008270
Ahy14g3100 403 SMART bboxneu5 13 60 IPR000315 GO:0008270
Ahy14g3100 403 SMART bboxneu5 61 103 IPR000315 GO:0008270
Ahy14g3100 403 CDD Bbox1_BBX-like 17 60 - -
Ahy14g3100 403 Pfam CCT motif 334 376 IPR010402 GO:0005515
Ahy14g3100 403 MobiDBLite consensus disorder prediction 152 187 - -
Ahy14g3100 403 ProSiteProfiles CCT domain profile. 334 376 IPR010402 GO:0005515
Ahy14g3100 403 ProSiteProfiles Zinc finger B-box type profile. 56 103 IPR000315 GO:0008270
Ahy14g3100 403 CDD Bbox1_BBX-like 60 103 - -
Ahy14g3100 403 MobiDBLite consensus disorder prediction 152 186 - -
Ahy14g3100 403 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 1 13 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g3100 Ahy-Chr14 139785977 139788259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g3100 1 403 C2C2-CO-like Transcription Factor Family AT3G02380 51.478 1.17e-120 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Ahy14g3100 zf-B_box 1.70E-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g3100 - - ahf:112744683 652.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g3100 14 139785977 139788259 Ahy4g2738 4 125410364 125412755 hybridization