Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g3058 ATGGGTTCTGTTTGTTGTTGTTTGAGTGTTAATGATTTTGAAGATTATATGAATCCAAATAGTCCTGTATATAGGAACCGTCAGTGCCTCAGTTCCGTCTTACAGAACTTTTTGAATGCGTATGCATCAATATTCCGTAGAGGGGAAATGCAGGCAATTCCTTCATCTATACAGGGGGCAGCATCTATGACTTCCACAGCATCGCTTGATAATTCTCTATCTGACATGTACCGCTCTCCTCCAAGGCCAATGCCTTATGATGCAGACCCGAGGCATTTCCGCTCTCAGCATGATAGACTAGTTTCACGACGTGAGAAGGGTTCAAGTCATGTGAATGATGAGGCAGAACCTCTAAGAAGTGATCTAGATGAGGATGACCAACAATCTTTAACTTCAAGCAACAAGTGGCATGAACGTGCTAGTGAAGATGGATCCAAAGAATACCACTCTAAGTCTTTAATAAGGCTTTCATCAGCAAGACCTACCACTGGAGTTGGACTTGTCTATTCGTCCTCAGAAGAGGAGGATTGCTGTCCAACTTGTCTTGAAGAATATACTGAAGAGAATCCGAAGATAGTGACAAAATGCTCTCATCATTTTCATCTTGGTTGCATTTATGAGTGGATGGAGAGAAGTGACACCTGTCCAGTTTGTGGGAAGGTGATGGTATTTGATGAAACGACGTAA 687 0.4236 MGSVCCCLSVNDFEDYMNPNSPVYRNRQCLSSVLQNFLNAYASIFRRGEMQAIPSSIQGAASMTSTASLDNSLSDMYRSPPRPMPYDADPRHFRSQHDRLVSRREKGSSHVNDEAEPLRSDLDEDDQQSLTSSNKWHERASEDGSKEYHSKSLIRLSSARPTTGVGLVYSSSEEEDCCPTCLEEYTEENPKIVTKCSHHFHLGCIYEWMERSDTCPVCGKVMVFDETT* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g3058 228 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 227 - -
Ahy14g3058 228 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 161 225 IPR013083 -
Ahy14g3058 228 Pfam RING-H2 zinc finger domain 173 218 IPR024766 GO:0008270
Ahy14g3058 228 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 1 227 - -
Ahy14g3058 228 SUPERFAMILY RING/U-box 173 225 - -
Ahy14g3058 228 MobiDBLite consensus disorder prediction 85 150 - -
Ahy14g3058 228 MobiDBLite consensus disorder prediction 71 152 - -
Ahy14g3058 228 SMART ring_2 178 218 IPR001841 -
Ahy14g3058 228 ProSiteProfiles Zinc finger RING-type profile. 178 218 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g3058 Ahy-Chr14 139354720 139358804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g3058 1 226 C3H Transcription Factor Family AT5G38895 53.097 4.55e-87 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g3058 - - ahf:112797939 447.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g3058 14 139354720 139358804 Ahy14g3058 14 139354720 139358804 ECH
Ahy14g3058 14 139354720 139358804 Ahy4g2698 4 124989298 124993458 hybridization