Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g3053 ATGATAATGGGTTCAGAGAGAGGGTGGAAGAAAGGGTCATGGACTCATGAAGAGGACAAGTTGCTCACTGAATATGTCACCTTGCATGGGGAGTGTAGGTGGAGTTCTGTGGCCAAGTTCACAGGTTTAAATAGGAGTGGCAAAAGTTGCAGGTTGAGATGGGTGAATTATTTGAGGCCTGGTCTCAAGAAGGGTCAATTAACACCAATGGAAGAAGGAATAATATTTGAATTGCATGCTATTTTGGGAAACAAGTGGTCAACAATAGCAAGGTACTTGCCAGGTAGAACTGATAATGAGATAAAGAACTATTGGAGAACCCACTTCAAAAAGAAAGAGGATTCCAAGCATAATAACAAGAAGCTAAAAAAGAGAAGATCAAAGGTGACAAAAGAGCAAGTAGTAATGGAGGACACCAACAAAAGCAATAATAATGAAAATACCAAATCCTATGATGATGAGACAAAAGAAAACTACTACAATGATCAACACAATAATATGGGGTTTATTTACCCTAATAATAATCCAACAATGTTATTAGAGCAGCAACAAAGCTTCCCTTTGATGCACCAAGATTATTTGTCATCACCTTCATGGCCAGACACTACAACAGCAGATTATGATGCCTTCTTGTGGTTTAGTTTATGGGACTTTGATGTACCACAAGGCTTTGAAGAACATGTTAACAACCTCACCAAATATGTGCTCCCAAACCAAGCTACCTTTGGTGATGGAGGGACTCCCATGCAAAAATAA 756 0.3902 MIMGSERGWKKGSWTHEEDKLLTEYVTLHGECRWSSVAKFTGLNRSGKSCRLRWVNYLRPGLKKGQLTPMEEGIIFELHAILGNKWSTIARYLPGRTDNEIKNYWRTHFKKKEDSKHNNKKLKKRRSKVTKEQVVMEDTNKSNNNENTKSYDDETKENYYNDQHNNMGFIYPNNNPTMLLEQQQSFPLMHQDYLSSPSWPDTTTADYDAFLWFSLWDFDVPQGFEEHVNNLTKYVLPNQATFGDGGTPMQK* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g3053 251 SMART sant 10 60 IPR001005 -
Ahy14g3053 251 SMART sant 63 111 IPR001005 -
Ahy14g3053 251 Pfam Myb-like DNA-binding domain 65 108 IPR001005 -
Ahy14g3053 251 Pfam Myb-like DNA-binding domain 11 58 IPR001005 -
Ahy14g3053 251 ProSiteProfiles Myb-like domain profile. 59 109 IPR001005 -
Ahy14g3053 251 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 113 IPR017930 -
Ahy14g3053 251 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 58 IPR017930 -
Ahy14g3053 251 MobiDBLite consensus disorder prediction 112 153 - -
Ahy14g3053 251 Gene3D - 66 141 - -
Ahy14g3053 251 CDD SANT 68 109 IPR001005 -
Ahy14g3053 251 MobiDBLite consensus disorder prediction 113 128 - -
Ahy14g3053 251 Gene3D - 10 63 - -
Ahy14g3053 251 PANTHER MYB TRANSCRIPTION FACTOR 5 230 - -
Ahy14g3053 251 SUPERFAMILY Homeodomain-like 8 105 IPR009057 -
Ahy14g3053 251 Coils Coil 112 132 - -
Ahy14g3053 251 ProSiteProfiles Myb-like domain profile. 6 58 IPR001005 -
Ahy14g3053 251 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 5 230 IPR044676 GO:0003700|GO:0006355|GO:0043565
Ahy14g3053 251 CDD SANT 13 58 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g3053 Ahy-Chr14 139296071 139297867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g3053 8 219 MYB Transcription Factor Family AT3G30210 50.926 2.71e-66 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy14g3053 Myb_DNA-binding 3.30E-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g3053 K09422 - gmx:100785540 260.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g3053 14 139296071 139297867 Ahy14g3053 14 139296071 139297867 ECH
Ahy14g3053 14 139296071 139297867 Ahy4g2693 4 124936499 124938174 hybridization