LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy14g3049	ATGGCTATGTTATTGGGAATCATTGGTGGGGTGGTGTTGGTGCTCTGTTTTTGCTCTGTTTTCTTGTTGAAGTGGAATGAAGTGAGGTATAGGAGGAAAGGATTGCCACCAGGGACAATGGGGTGGCCTCTTTTTGGAGAAACCACTGAGTTTCTTAAGCAAGGTCCAAACTTCATGAAACACCAGAGAACAAGGTATGGTAGTTTTTTCAAATCACACATACTTGGGTGTCCTACCATAGTGTCAATGGATCCAGAGCTGAACAGATACATTCTGATGAATGAATCAAAAGGGCTTGTTCCTGGTTACCCTCAATCAATGTTGGATATCTTAGGAAAATGCAATATTGCAGCTGTTCATGGCTCCACTCACAAGTATATGAGAGGTGCATTATTATCCATCATTAGCCCTACTTTGATCAAAGATCAGCATCTGCCTAAGATTGATGAGTTCATGAGATCTTTTCTTAGTCATTGGGATAACAGAATCATCAACCTTCAAGACAAAACCAAAGAGATGGCATTTCTCTCATCACTTAAGCAGATTGCTGGCATGGAATCTAGCTCAATATCTCATCCATTCATGACAGAGTTCTTTAAGCTTGTTCTAGGAACACTCTCCTTGCCTATTGATCTTCCCGGCACAAATTATCGCCGCGGACTACAGGCAAGGAAGAACATAGTTAGCATTCTAAGTCAGTTGCTAGATGAAAGGAGAGTCTCCCAAGAAACACACCAAGACATGCTTGGAAGCTTGATGATGGGTAGAAGAGAAAACAGATACAAATTAACTGATGAAGAGATCATTGATCTGATAATCACAATCATGTATTCTGGTTATGAAACTGTTTCAACTACATCAATGATGGCAGTCAAGTACCTCCATGATCATCCCAAAGTTCTTGAAGAAATGAGAAAAGAGCATTTTGCTATAAGAGAGAGAAAGAAGCCAGAGGATCCAATTGATTGTAATGATCTTAAGTCAATGAGGTTCACTCGTGCGGTTATTTTTGAGACCTCGAGATTAGCTACAATAGTCAATGGTGTTCTGAGAAAAACAACTCATGACATGGAACTAAATGGGTATTTGATTCCTAAAGGTTGGAGAATATATGTATATACAAGAGAGATAAATTATGACCAGTTTCTGTATCAAGATCCACTGACATTTAATCCATGGAGATGGCTGGGAAATAGCTTAGAGTCACAGAGCCACTTCTTGATATTTGGAGGAGGCACTAGGCAGTGTCCAGGAAAAGAGTTGGGAATAGCAGAAATTTCCACTTTCTTACATTATTTTGTAACTAGATACAGGTGGGAAGAAGTAGGAGGAGATAAACTAATGAAATTTCCTAGAGTTGAGGCACCAAATGGACTTCACATTAGGGTCTCATCTTTTACTAACTAG	1407	0.3959	MAMLLGIIGGVVLVLCFCSVFLLKWNEVRYRRKGLPPGTMGWPLFGETTEFLKQGPNFMKHQRTRYGSFFKSHILGCPTIVSMDPELNRYILMNESKGLVPGYPQSMLDILGKCNIAAVHGSTHKYMRGALLSIISPTLIKDQHLPKIDEFMRSFLSHWDNRIINLQDKTKEMAFLSSLKQIAGMESSSISHPFMTEFFKLVLGTLSLPIDLPGTNYRRGLQARKNIVSILSQLLDERRVSQETHQDMLGSLMMGRRENRYKLTDEEIIDLIITIMYSGYETVSTTSMMAVKYLHDHPKVLEEMRKEHFAIRERKKPEDPIDCNDLKSMRFTRAVIFETSRLATIVNGVLRKTTHDMELNGYLIPKGWRIYVYTREINYDQFLYQDPLTFNPWRWLGNSLESQSHFLIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEEVGGDKLMKFPRVEAPNGLHIRVSSFTN*	469

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Ahy14g3049	468	PRINTS	E-class P450 group I signature	333	351	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ahy14g3049	468	PRINTS	E-class P450 group I signature	406	416	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ahy14g3049	468	PRINTS	E-class P450 group I signature	416	439	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ahy14g3049	468	PRINTS	E-class P450 group I signature	63	82	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ahy14g3049	468	PRINTS	E-class P450 group I signature	267	284	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ahy14g3049	468	PRINTS	E-class P450 group I signature	373	397	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ahy14g3049	468	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	409	418	IPR017972	GO:0005506\|GO:0016705
Ahy14g3049	468	SUPERFAMILY	Cytochrome P450	29	451	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ahy14g3049	468	Pfam	Cytochrome P450	36	450	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ahy14g3049	468	PANTHER	CYTOCHROME P450 26	8	464	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy14g3049	Ahy-Chr14	139227732	139231103	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy14g3049	83	466	Cytochrome P450	AT5G38970	70.130	0.0	566

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy14g3049	K09590		-	gmx:100785414	829.706

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Event-related genes

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Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
Ahy14g3049	14	139227732	139231103	Ahy14g3049	14	139227732	139231103	ECH
Ahy14g3049	14	139227732	139231103	Ahy4g2689	4	124870227	124873745	hybridization
Ahy20g2712	20	137078971	137085518	Ahy14g3049	14	139227732	139231103	PCT
Ahy10g2198	10	110676131	110681250	Ahy14g3049	14	139227732	139231103	PCT
Ahy14g3049	14	139227732	139231103	Ahy20g2712	20	137078971	137085518	PCT
Ahy14g3049	14	139227732	139231103	Ahy10g2198	10	110676131	110681250	PCT

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