Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g3043 ATGAGGCTTGTCATAATAATACCTCTCTGTGTTATTGTTCTGTTCTCTTATGCAGCTGCATATGATCCTTTGGATCCAAATGGAAACATAACAATCAAATGGGATGTTATGTCTTGGACACCAGACGGCTATGTGGCAGTGGTAACAATGAGCAATTTCCAAATGTTCCGGCACATCCCGAATCCGGGATGGACCCTGGGATGGTCATGGGCAAAGAAAGAGGTTATATGGACCATGGTAGGAGCTCAAACCACAGAGCAAGGAGATTGTTCTAAGTTCAAAGGCAATGTACCTCACTGCTGCAAGAAAACTCCAACAGTTGTAGACCTTCTCCCTGGTGTACCTTACAATCAGCAATACTCAAACTGCTGCAAGGGTGGAGTGGTTTCAGCATGGGGCCAAGATCCTTCGAGCGCTGTCTCCGCCTTCCAAGTCAGTGTTGGACAAGCTGGCACCTCCAACAAGACAGTTAAACTCCCCAAGAACTTCACTCTCTTGGCTCCAGGACCTGGCTATACCTGTGGCCCTGCCAAGGTTGTTCCCTCCACTGTTTTCCTTACACAAGATAAGCGCCGCAAGACTCAAGCACTAATGACATGGAATGTTACCTGCACATACTCGCAATTTCTGGCTAGAAAGAACCCGAGTTGCTGTGTATCTTTGTCATCCTTCTACAATGAAACCATTACTCCTTGTCCTACTTGTGCCTGTGGTTGCCAAAACAAGAAGAATTGTGTCAAGAGTGACTCGAAATTCCTCAACACACCCGGCGCTCACACTCCGAAGAGAGACAATGATCCATTGCTGCAGTGCACTCATCATATGTGTCCAATCAGGGTACACTGGCATGTGAAGCTCAACTACAAGGACTACTGGCGAGTCAAGATCGCCATAACGAACTTCAACTATAGAATGAACTACACCCTCTGGACTCTCGCCGTCCAGCATCCGAATCTCAACAATATCACCCAAGTTTTCAGTTTTGATTACAGGCCAATTCTTCCCTATGTGTCCATCAATGATACTGGTATGTTCTATGGCATGAAATTCTATAATGATCTATTAATGGAAGCTGGACCAAGCGGGAATGTTCAATCCGAAGTGCTTCTTCGAAAGGATCAGGATACCTTCACGTTCAAGCAAGGATGGGCGTTTCCTCGCAAGGTTTACTTCAATGGTGAAGAATGCATGCTTCCACCACCAGATACCTACCCATTCCTCCCCAATGCTGCCCCTGTAAAGCTACTTAACTTAACATCACTCATTTTCTTCTTGATTCTCTTGCTTGTAGCTTAG 1296 0.4583 MRLVIIIPLCVIVLFSYAAAYDPLDPNGNITIKWDVMSWTPDGYVAVVTMSNFQMFRHIPNPGWTLGWSWAKKEVIWTMVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQYSNCCKGGVVSAWGQDPSSAVSAFQVSVGQAGTSNKTVKLPKNFTLLAPGPGYTCGPAKVVPSTVFLTQDKRRKTQALMTWNVTCTYSQFLARKNPSCCVSLSSFYNETITPCPTCACGCQNKKNCVKSDSKFLNTPGAHTPKRDNDPLLQCTHHMCPIRVHWHVKLNYKDYWRVKIAITNFNYRMNYTLWTLAVQHPNLNNITQVFSFDYRPILPYVSINDTGMFYGMKFYNDLLMEAGPSGNVQSEVLLRKDQDTFTFKQGWAFPRKVYFNGEECMLPPPDTYPFLPNAAPVKLLNLTSLIFFLILLLVA* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g3043 431 PANTHER PROTEIN COBRA 4 429 IPR006918 GO:0010215|GO:0031225
Ahy14g3043 431 PIRSF COBRA 1 431 IPR006918 GO:0010215|GO:0031225
Ahy14g3043 431 PANTHER COBRA-LIKE PROTEIN 4 429 - -
Ahy14g3043 431 Pfam COBRA-like protein 44 207 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g3043 Ahy-Chr14 139187131 139189793 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g3043 20 428 COBRA Gene Family AT3G29810 66.748 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g3043 - - gmx:100783410 817.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g3043 14 139187131 139189793 Ahy4g2683 4 124828705 124831164 hybridization
Ahy20g2708 20 137021110 137024060 Ahy14g3043 14 139187131 139189793 PCT
Ahy10g2193 10 110556753 110559859 Ahy14g3043 14 139187131 139189793 PCT
Ahy14g3043 14 139187131 139189793 Ahy20g2707 20 137017631 137020918 PCT
Ahy14g3043 14 139187131 139189793 Ahy10g2192 10 110553231 110556504 PCT