LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy14g3010	ATGATATTGAAATGTTTGGGGTTTTGTGGTTGGAAGAAGAAGGAAAGTTCATCATCAAAGAGAAAGTATAAAACAGTAATAGAAGAGCTATGCCATCAATTTTGCATGGAAGATATTAGAAAAGCAACCAACAACTTTGACAAAAAACTTCTCATTCTACAAGACGACTCTTATTGTAGCGTGTACAAAGGCTGTCTCGAGTATAACGGTACAACTGAATATACAATTGCAGTAAAACCCGGGCGCGATACCATCCGTTCATATATGGTGAAGGAAATTGAGGTGCTATGTCAGCTTCGTCACCCAAATATAATCTCACTTATAGGCTTCTGCGACAATGAAAATGAAATGATTGTTGTGTACGAGTACATGGCCAATGGATCACTTGGTGATTACTTGAGTAAAAGGAAGAAGGAACCGCTATCATGGAACAAGAGACTAGAGATCTGCATCGGAGCAGCACGTGCTCTACACTACCTTCACGCTGGAGCCAAGCGTACTATCTTTCATCGCTTCATACAACCCGCTAACATTCTATTGGATGAGAATATGGTACCCAAACTCACAAATTTTGAAACTTCCTTGCAAGGACCACTCTCTACCTCCAAGCCAAAACCAATTATAGATATTATTCGGGGTACAATTGGATACATTCCCGATGAAGTGCTTACACTTGGCATCTATACTGATAAATGTGATGTTTACTCCTTTGGTAAAGTTCTACTAGATGTGATATGCGGCACAAAGGACGAGGATTTGATGAACAAGATCAATATGTTAGCAAGCCTACACTTTGGGGAGAAGACGAATGAATATTTGGAACATTTCCCCCCAAGCAAGCTCTTATGTTCGTGGATTCCTATGGAGGAGATGGTTGATCCAGATCTTAACGGAAAGATTGCTCCCGAGTGTTGGGATGCAGTAATGAGTATTGCTCAAAGATGCATAGACTATGAAGCAGATGAGCGACCAACAATGGGTGAAGTAGAGTTGTTGCTTGAGAGTGCTCTCTCATTGCAGCAACAATCTGATATAACACACTCTTCTGCTGTTCATTACACCTTATCCTCCACCACCTATATTCATATGCAACCATCAATTTGTATTCATGCCAATAACATAGAGGACATGCTAAACCATCAATTTCCCCTGCCTGATATTAGAGAAATGACCAATAATTTCGATGACGATTATGGAATAATGGGAAAAGGTAGTTTTGGGGAAATGTACCGAGGTCGTGTCAGACTTAATGGTGTAACAGATAATTACTACTATTGGATCGCAATAAAGAAGATGGATTGGCCATCAATTTGTGATTCTGGGATGCAGTTCAACTTCAGGAAAGAAATTGAGAAAATCTGTGTGCTTCGCCATCCAAATTTGGTGTCTCTTTTAGGATTCTGTGATGATGATGATGATGATAATGATGATGATGATGATCTTGATGATTCTGTTGACAATGATAATGATGATGATGCCAAGATACTTGTATCCGAGTTCATACAGAATGGAAGTCTACTTTATAACCTGCATGATAGTCATCGGAATAAGAAAGCTCTGACATGGAAGAAACGACTGCAAATATGCATTGGAGTAGCACAAGGACTACACTACCTTCACACAGCATCCATTTTTCACCGTAACATTAAACTTACTAACATCCTTTTGGATCGCGCTATGGTGCCTAAACTCTCAGATTTTGGGTTTCCCTGGTCAAACCCAATACATGCAGGTTATTATGCTGCTCCTGAATGGTCTGAAGGTCATGAATTCACAGATAAGTGTGATGTTTACTCTTTTGGTATAGTTCTACTACAAGTAGTATTCACGAGCAAGCTACCGCTTATTGAGGGGGAGAGTGATCCGATTCTCAAGGGTAAGATTGCACCACAGTGCTGGGAAGTTTTCTTAGACATCACACAACGGTGTTTGAAATTTGAAGCAAATGAGAGACCAACCATGAATGAAGTTATAAGTCAACTTGAGCATGCTCTGGCACTACAAGAGGAAGCAGATGCCAACACTAGTGATGAATACAACTTATTATCAATGACCTTTGATGATGATGTTTTATTAGGAAGAGCCTTATGTTAG	2094	0.3983	MILKCLGFCGWKKKESSSSKRKYKTVIEELCHQFCMEDIRKATNNFDKKLLILQDDSYCSVYKGCLEYNGTTEYTIAVKPGRDTIRSYMVKEIEVLCQLRHPNIISLIGFCDNENEMIVVYEYMANGSLGDYLSKRKKEPLSWNKRLEICIGAARALHYLHAGAKRTIFHRFIQPANILLDENMVPKLTNFETSLQGPLSTSKPKPIIDIIRGTIGYIPDEVLTLGIYTDKCDVYSFGKVLLDVICGTKDEDLMNKINMLASLHFGEKTNEYLEHFPPSKLLCSWIPMEEMVDPDLNGKIAPECWDAVMSIAQRCIDYEADERPTMGEVELLLESALSLQQQSDITHSSAVHYTLSSTTYIHMQPSICIHANNIEDMLNHQFPLPDIREMTNNFDDDYGIMGKGSFGEMYRGRVRLNGVTDNYYYWIAIKKMDWPSICDSGMQFNFRKEIEKICVLRHPNLVSLLGFCDDDDDDNDDDDDLDDSVDNDNDDDAKILVSEFIQNGSLLYNLHDSHRNKKALTWKKRLQICIGVAQGLHYLHTASIFHRNIKLTNILLDRAMVPKLSDFGFPWSNPIHAGYYAAPEWSEGHEFTDKCDVYSFGIVLLQVVFTSKLPLIEGESDPILKGKIAPQCWEVFLDITQRCLKFEANERPTMNEVISQLEHALALQEEADANTSDEYNLLSMTFDDDVLLGRALC*	698

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy14g3010	697	Gene3D	Transferase(Phosphotransferase) domain 1	124	358	-	-
	Ahy14g3010	697	Gene3D	Transferase(Phosphotransferase) domain 1	482	666	-	-
	Ahy14g3010	697	PANTHER	TYROSINE KINASE FAMILY PROTEIN	374	473	-	-
	Ahy14g3010	697	PANTHER	OS07G0166700 PROTEIN	374	473	IPR045272	GO:0004714\|GO:0006468
	Ahy14g3010	697	ProSiteProfiles	Protein kinase domain profile.	395	666	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy14g3010	697	SUPERFAMILY	Protein kinase-like (PK-like)	23	332	IPR011009	-
	Ahy14g3010	697	ProSiteProfiles	Protein kinase domain profile.	47	337	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy14g3010	697	Pfam	Protein tyrosine and serine/threonine kinase	401	661	IPR001245	GO:0004672\|GO:0006468
	Ahy14g3010	697	Pfam	Protein tyrosine and serine/threonine kinase	55	329	IPR001245	GO:0004672\|GO:0006468
	Ahy14g3010	697	PANTHER	OS07G0166700 PROTEIN	489	683	IPR045272	GO:0004714\|GO:0006468
	Ahy14g3010	697	PANTHER	OS07G0166700 PROTEIN	17	355	IPR045272	GO:0004714\|GO:0006468
	Ahy14g3010	697	Gene3D	Phosphorylase Kinase; domain 1	8	123	-	-
	Ahy14g3010	697	Gene3D	Phosphorylase Kinase; domain 1	359	475	-	-
	Ahy14g3010	697	PANTHER	TYROSINE KINASE FAMILY PROTEIN	489	683	-	-
	Ahy14g3010	697	PANTHER	TYROSINE KINASE FAMILY PROTEIN	17	355	-	-
	Ahy14g3010	697	SUPERFAMILY	Protein kinase-like (PK-like)	382	669	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy14g3010	Ahy-Chr14	138981655	138984660	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy14g3010	371	671	Receptor kinase-like Gene Family	AT5G39000	34.604	8.86e-42	161

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Ahy14g3010		PK_Tyr_Ser-Thr	6.00E-34	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy14g3010	-		-	adu:107486599	1214.52