Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g2993 ATGGCTTCTTCTAACAACAACATCTCCATCAAAATCCTTGACAAATACACAGTTTCTCCACCACCAACGCCATCAACCGGTGTTACTGTTTCTCTACCTCTCACTTTCTTTGACTTGTTCTGGGTTCGCTTCCACCCCGTTGAGCGTGTCTTCTTCTACAAACTTCACTCTCCTCCATCTTTCTTCATCGAACATGTGCTTCCCAAGCTCAAAACCTCGCTCTCTCTTACCCTCCAACACTTCCTCCCTCTTGCTGGAAACCTACTTTGGCCTTCTCATTCAGATAAACCAATTCTTCAATACAATCTTGGTGATGGTGTTTCACTTCTCATAGCAGAATCCGATGCAGATTTCAACCATCTTTTGGGCTATAACTCACCGCGTGAAGCTTCTGAAACTCGATGCTTTGTACCAGAACTGGAAACACTGGAATCTCGTGCTGCTCTTATGTCTCTTCAGATTACTCTCTTCCCGAACAGTGGATTCAGCATCGGAATCAGCACCCACCATGCTGCTCTCGATGGGAAATCTTCCACCATGTTCATCAAAGCATGGGCTTCCATATGTCAAAGCCTTGAAGAAGAACAGAAAGAATCACCCACTTTGGTTCGCGAATTCGAGCCTTTCTTTGATAGAGAAGTTATCAAAGATCCAAAGGATGTTGGACTCTTGTTATTGAACCATTGGTCGGATGTCATGTCCAAAATGTTCCCTGATGAGAACAACATCAAGAAAAGCTTGAAGATTCTACCGTTCGAACCCAAGGTGAAGGACTCGGTTCGTGCAACGTTCAAGCTCACGCGTTCAGATTTGGAGAAGGTGAAGAAAAAGGTGTTGTCCAATTGGAACAGCAACGTTAATAACGGTAATGATGAAGAATCTACAAACACACCACCTAGTACTCTTTCTACTTTTGTTCTAACATGCAGCTATGTCTTGGTTTGTATCGCTAAGGCGATTAATGGAGTTTTTAAGGAGAGACAAAAATTCGGGTTCGCTTTCACTGGTGATTGTAGGAAGAGGTTAGAGCCTCCAATACCTGAAAATTATTGTGGTAACTGTGTGTGGGGTAATTTTGTGGATGCAAAACCAGAGGACTATGTTAAAGAAAATGGAGTGGTTCTTGTCGCTAAGGGAATTTACAAGACGACAAAAATGTTGGGTATTGAAGGTTTTCGTGGTGTAGAAGCATCAGCGTTTGATAAGTACATGAATATGGCTAAAGAAGGAGTTGAAATAATTGGTATTGCTGGTTCCAATAGGTTTGGTGTTTATGGTATTGATTTTGGTTGGGGAAAACCTGAAAAAGTTGAGATAGCTTCGATTGATAGAGGTCTAACGATGGGTTTGGCTGAGAATAGTGATGGCAATGAAGGTGGGGTCGAGGTTGGTCTTGTTCTTAACAAGCAGGTGATGGATCTGTTTCGGACTTTGTTTCGTGAAGGACTTGAAGATGATTAA 1461 0.4244 MASSNNNISIKILDKYTVSPPPTPSTGVTVSLPLTFFDLFWVRFHPVERVFFYKLHSPPSFFIEHVLPKLKTSLSLTLQHFLPLAGNLLWPSHSDKPILQYNLGDGVSLLIAESDADFNHLLGYNSPREASETRCFVPELETLESRAALMSLQITLFPNSGFSIGISTHHAALDGKSSTMFIKAWASICQSLEEEQKESPTLVREFEPFFDREVIKDPKDVGLLLLNHWSDVMSKMFPDENNIKKSLKILPFEPKVKDSVRATFKLTRSDLEKVKKKVLSNWNSNVNNGNDEESTNTPPSTLSTFVLTCSYVLVCIAKAINGVFKERQKFGFAFTGDCRKRLEPPIPENYCGNCVWGNFVDAKPEDYVKENGVVLVAKGIYKTTKMLGIEGFRGVEASAFDKYMNMAKEGVEIIGIAGSNRFGVYGIDFGWGKPEKVEIASIDRGLTMGLAENSDGNEGGVEVGLVLNKQVMDLFRTLFREGLEDD* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g2993 486 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 9 486 - -
Ahy14g2993 486 Pfam Transferase family 10 477 - -
Ahy14g2993 486 Gene3D - 255 485 IPR023213 -
Ahy14g2993 486 PANTHER - 9 486 - -
Ahy14g2993 486 Gene3D - 6 241 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g2993 Ahy-Chr14 138824465 138826437 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g2993 38 481 Monolignol Biosynthesis Gene Families AT5G48930 25.325 9.50e-20 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g2993 - - aip:107635420 871.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2993 14 138824465 138826437 Ahy4g2637 4 124429666 124431698 hybridization