Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g2920 ATGGCAGAAATATGTGATATGTTAATGGATGTTAATCCAAGAAAACTCCAATGGACCTTCAAAGTTTATGTTGTGCACTTATGGGAAGTTCCAAACAAGTTCAACAAAAACGAAATCAATGGTATGGAGATGCTTCTTCAAGATATGAAGGGTGGTAGAATCCAAGCTTCAATCCCAAAGCCATTAGTGAAGAAGTGGAGAGGCAGCATATTGGAGTTTAACATGTACGTCATGTCTAACTTCATTGTGGTGGATAAGAAAGAAAAAATCAGGACAACCAGGAATAGATGGACTATAAACTTTTCACAGAGAACCACTGTTATTCCGGTATCTCATCCAAGTTTTCCTCTAAAGGCATTTTCTTTTAAGCCAATCCCTGAGCTGCTGGCAGCTGAGAAGCTCGATGATTCATTACTTATAGATGTGATAGGTGAAGTTGTTGGAAAAGAAGATCCAAGAGAATTGATTACTAGCAAAGGCAAGGAGACAAAACGTTTGGCTGTTTTGATAGAGGACCTTGAAAATAACAGTATTGGTTGTGTGTTGTTTGGAGACATGGTAGATCAAATTCTACCCTATCTTAAAGAAGAAAGGGTTGAGCCTTTGATAGTTATAGCGCAGTGCTTTAAACCAAGCAGGTGGAATGAAAAAACATCAGTACAAAGTCATTTTGATTATTCAAAGTTACGTATTAATGCTGATCTGGAAGAGGTTAGAGTTTTCCGTGACAGGAGGCTTTCTGGGAAACCTGCAAACTCGGCTAGAATTAGTCAAGTGTCATCCCATGGTCCGCGTTCTGGTGCTGAGGAACTAAGGAGGGGAGAAGCCATTGTTAAAACTATAGAGGAAGTCCTCAACTCAACACAGGAAGGGCCTGTATGGATTGCTGGTACAATAGTTTCAATAAACTCTGACAAGGATGATTGGTTTTATAAATCATGTCGAAAATGCCCGAAAAAAGTAGAAACTCCTATTGGAAACAGATATGAGTGTGGAAAATGTGGACATACTCATGGAGCTGCATCAGTTAGGTACAAAGTTGAGGTAATGGCATGTGATGGAACTGGGAGCATAGCATTGCTAATGTGGGATAGGGAGACAGTCCAGCTCTGTAGGAGGCAGGCGGACCAGATCAAGGATGAGGTTGTTTTGGGTGGAGATGGATACCCCCCAACTTTGGAAACAATGATGGATAGAAAGTTACTTTTCAAGGTTAATGTTAAATCTTCAAACATTAGACAATATGATCATATTTATACAGTCATGAAAATTTGTGATGATGAGAAAATTGTAAAGATGAATCCCCCAAAGGAAATTCAAAACTCCGACTTTGCTGCTGTAAATGAGAATGTGTGCAGTGACTCAATTGATGTGTCAGCAGTTGTGGCCAATATGCATAACAACACTGATTCTATTCTTACTTTGGATGATTTGGAAGAATGTGTCACCAGCCTTAAAGAGGAAACCCCAATTAAAAGAGCTGCCATGGGGGTAAAACATACTTTGACTATAAATGTTGACAATGAAAACGAAGTGGGATTTTCAACCAACAAATTTAGTCGAAAAGGTGGAAAAAGACAGAAGATACAAATTAGTGGGAGTGAAAATTGA 1611 0.3911 MAEICDMLMDVNPRKLQWTFKVYVVHLWEVPNKFNKNEINGMEMLLQDMKGGRIQASIPKPLVKKWRGSILEFNMYVMSNFIVVDKKEKIRTTRNRWTINFSQRTTVIPVSHPSFPLKAFSFKPIPELLAAEKLDDSLLIDVIGEVVGKEDPRELITSKGKETKRLAVLIEDLENNSIGCVLFGDMVDQILPYLKEERVEPLIVIAQCFKPSRWNEKTSVQSHFDYSKLRINADLEEVRVFRDRRLSGKPANSARISQVSSHGPRSGAEELRRGEAIVKTIEEVLNSTQEGPVWIAGTIVSINSDKDDWFYKSCRKCPKKVETPIGNRYECGKCGHTHGAASVRYKVEVMACDGTGSIALLMWDRETVQLCRRQADQIKDEVVLGGDGYPPTLETMMDRKLLFKVNVKSSNIRQYDHIYTVMKICDDEKIVKMNPPKEIQNSDFAAVNENVCSDSIDVSAVVANMHNNTDSILTLDDLEECVTSLKEETPIKRAAMGVKHTLTINVDNENEVGFSTNKFSRKGGKRQKIQISGSEN* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g2920 536 Gene3D - 7 112 IPR012340 -
Ahy14g2920 536 PANTHER BNAC07G49340D PROTEIN 26 432 - -
Ahy14g2920 536 CDD RPA1_DBD_C 278 440 IPR013955 -
Ahy14g2920 536 Pfam Domain of unknown function DUF223 43 114 IPR003871 -
Ahy14g2920 536 Gene3D - 262 433 IPR012340 -
Ahy14g2920 536 Gene3D - 114 251 IPR012340 -
Ahy14g2920 536 Pfam Replication factor-A C terminal domain 296 424 IPR013955 -
Ahy14g2920 536 CDD RPA1_DBD_B_like 141 245 - -
Ahy14g2920 536 CDD RPA1_DBD_A_like 21 107 - -
Ahy14g2920 536 SUPERFAMILY Nucleic acid-binding proteins 120 244 IPR012340 -
Ahy14g2920 536 PANTHER REPLICATION FACTOR A 1, RFA1 26 432 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Ahy14g2920 536 SUPERFAMILY Nucleic acid-binding proteins 279 426 IPR012340 -
Ahy14g2920 536 SUPERFAMILY Nucleic acid-binding proteins 10 114 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g2920 Ahy-Chr14 137922758 137925278 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g2920 11 363 Core DNA Replication Machinery Family AT2G06510 25.474 4.19e-16 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g2920 - - aip:107630584 727.243