Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g2902 ATGGCAAGGAAGAGAAAGGTTGCTGAAGCAATTGAAGAAGAAAACATGGAATCATGGCATGAAATGATCAAAGAAGGTGCAGCATTAGGAGAATCTACAAGAAGATCAAGAAAGAGGTTTGTTGGTGTGAGACAAAGGCCATCAGGAAGATGGGTGGCTGAGATCAAAGATACCATTCAGAAGATCAGAGTTTGGTTAGGAACTTTTGATACTGCTGAAGAAGCTGCAAGAGCCTATGATGAAGCAGCTTGGATCCTCCGCGGATCCAATACTCGAACCAACTTTGATCCTTGTTATCCTCATTCTTCCTCAAATCCTGCTCTTTCCTCAAAGATTGCAAATCTCCTCCTTCAAAGGCTTAAAGCAAAGAATAATATCATCTCTTGTTCTAATCTTAGTACTACTCACCAACAAGATCATCAAGCTGATGTGTATGGAGCAGAGTCGAAAGCTTTCTCGATTGATCAATTCGCAGATTTCCTTTATGATCCTGAAGCTTGTAGCGCAAGCAACAACGAATTTAGTGATAATATTGAACAAATTGATTGCATCACTAGTAGTTTTGAATCGTGTTTAACAGAGAAAGATGCCAAAAGGGAGAAAGAAATGGATGCAACACAGACATCAAGCATTGACTCGAATTCAAGAGTGAAAAATGAGGAAGAAATCGAAGAAGAAGAAGGTATGATTGTTGAGGATTTCAGGTTCCTGGATGAGAATGCTATTGTTTCATCAAGTTACTGTTATTCTCCTTTTGAGATTGTTGAAGAGATGGAGGAGCCTGTGGAGGCAGAGAACTATGATGGTGATGATGAGCCTTCAATGATGAAAGCTATAATGAACAGAATGAAGTATGAGAGAAAGTTCTCAGCTTCTCTCTATGCCTTCAATGGGATACATGATTATGAGTGCTTGAAGTTGAAGCTTCAGTCAGGGAACATAAAGAGTAGAACAGGAATTTCAGATCAAATTAGCAAACTTAACAAGGCTTGCAGCAAGAACAAAAATGAGGTTAATAAGGAGGAAGATGAAAAGGAAAAGGAGAAGGAATCTATTGATGGAGATTTGTTGTTTTGGAACTCCCTTGATCTCCCTAATATTTTCTAA 1107 0.3884 MARKRKVAEAIEEENMESWHEMIKEGAALGESTRRSRKRFVGVRQRPSGRWVAEIKDTIQKIRVWLGTFDTAEEAARAYDEAAWILRGSNTRTNFDPCYPHSSSNPALSSKIANLLLQRLKAKNNIISCSNLSTTHQQDHQADVYGAESKAFSIDQFADFLYDPEACSASNNEFSDNIEQIDCITSSFESCLTEKDAKREKEMDATQTSSIDSNSRVKNEEEIEEEEGMIVEDFRFLDENAIVSSSYCYSPFEIVEEMEEPVEAENYDGDDEPSMMKAIMNRMKYERKFSASLYAFNGIHDYECLKLKLQSGNIKSRTGISDQISKLNKACSKNKNEVNKEEDEKEKEKESIDGDLLFWNSLDLPNIF* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g2902 368 Coils Coil 324 351 - -
Ahy14g2902 368 Pfam AP2 domain 39 83 IPR001471 GO:0003700|GO:0006355
Ahy14g2902 368 PRINTS Ethylene responsive element binding protein signature 40 51 IPR001471 GO:0003700|GO:0006355
Ahy14g2902 368 PRINTS Ethylene responsive element binding protein signature 62 78 IPR001471 GO:0003700|GO:0006355
Ahy14g2902 368 ProSiteProfiles AP2/ERF domain profile. 39 96 IPR001471 GO:0003700|GO:0006355
Ahy14g2902 368 CDD AP2 38 96 IPR001471 GO:0003700|GO:0006355
Ahy14g2902 368 SUPERFAMILY DNA-binding domain 39 96 IPR016177 GO:0003677
Ahy14g2902 368 Gene3D AP2/ERF domain 38 97 IPR036955 GO:0003700|GO:0006355
Ahy14g2902 368 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 11 325 - -
Ahy14g2902 368 SMART rav1_2 39 102 IPR001471 GO:0003700|GO:0006355
Ahy14g2902 368 PANTHER AP2/ERF DOMAIN TRANSCRIPTION FACTOR 11 325 - -
Ahy14g2902 368 MobiDBLite consensus disorder prediction 199 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g2902 Ahy-Chr14 137718496 137720269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g2902 31 116 AP2-EREBP Transcription Factor Family AT5G19790 69.767 1.92e-33 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Ahy14g2902 AP2 5.60E-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g2902 K09286 - gmx:100786711 380.178