Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g2881 ATGGACATAGCAGCACAAACAACAATCAACAACAACAACATCAACAATAGTAGCACTACTCCAACAAAATCATCACCACCAACTGAAGAACATGAAACTGAAACACCAACTAGGATTATTCAAAACACCACTACTACTACTACTACTACAACCATACCCAACACACCAACACCATCAAAGGCTTTAACTTTCTCAAATGGGGTCCTAAAACGCCACCATCCTCACCATATCTCCGCCGCCAACCACCACCACCAACTCGTTGTATACAAGGAATGCTTGAAGAACCACGCCGCCGCTCTCGGCGGCCACGCGCTCGACGGCTGTGGGGAGTTCATGCCCGCACCCACTGCCACCGCCGGCGACCCTACATCCATCAAGTGCGCCGCCTGCGGCTGCCACAGGAACTTCCACCGCCGTGAGCCAGAGGACCCGCTTATCTCCTCTGCCTTCGAGTTTCATTCACAAAACCGCCACCATCCTCCTCCACCGCCTCCTCCACCGCCTCACCGGAGCCCTAACTCGGCATCTCCGCCGCCGATCTCCTCCGCTTACTATCACCACCCGTCAGCAGCACCTCACATGCTACTTGCCCTCTCCGGCGCTGGCATCGCCGCGCCGCCGGAGAGCACCGCGGCACCAATTTCCGCCGCCGCAGCTTTAGCTTCTCCGAGGAAGAGGTTCAGGACGAAGTTCAGCCAGGAGCAGAAGGAGAAGATGCACAAGTTCGCAGAGCGTGTCGGGTGGAAGATGCAGAAGAGAGACGATGATTTGGTTCAAGAGTTCTGCAGCGAGGTTGGCGTTGATCGTGGTGTTCTCAAAGTCTGGATGCATAACAACAAGAACAATCTCGCAAAGAAAGAGAGTAATGGCGCTGCTGTTACCACCATTAACGGTGGTGTTGGTGTTCTTGGTAGTGGTGGTGGTAGCAGAAGCATTATTATGGAGGAAGATCCTAATAATAACAACAACAACAATGGTAATGGTGTTGGTGTTGGTGTTAATGGCGGTGCTAATGGTTCTTCTTCTTCTTCTTAA 1035 0.5256 MDIAAQTTINNNNINNSSTTPTKSSPPTEEHETETPTRIIQNTTTTTTTTTIPNTPTPSKALTFSNGVLKRHHPHHISAANHHHQLVVYKECLKNHAAALGGHALDGCGEFMPAPTATAGDPTSIKCAACGCHRNFHRREPEDPLISSAFEFHSQNRHHPPPPPPPPPHRSPNSASPPPISSAYYHHPSAAPHMLLALSGAGIAAPPESTAAPISAAAALASPRKRFRTKFSQEQKEKMHKFAERVGWKMQKRDDDLVQEFCSEVGVDRGVLKVWMHNNKNNLAKKESNGAAVTTINGGVGVLGSGGGSRSIIMEEDPNNNNNNNGNGVGVGVNGGANGSSSSS* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g2881 344 PANTHER HOMEOBOX DOMAIN, ZF-HD CLASS PROTEIN 1 296 - -
Ahy14g2881 344 Gene3D - 213 286 - -
Ahy14g2881 344 Pfam ZF-HD protein dimerisation region 87 141 IPR006456 -
Ahy14g2881 344 MobiDBLite consensus disorder prediction 309 344 - -
Ahy14g2881 344 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 89 140 IPR006456 -
Ahy14g2881 344 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 224 281 IPR006455 -
Ahy14g2881 344 MobiDBLite consensus disorder prediction 314 344 - -
Ahy14g2881 344 MobiDBLite consensus disorder prediction 1 41 - -
Ahy14g2881 344 MobiDBLite consensus disorder prediction 1 26 - -
Ahy14g2881 344 MobiDBLite consensus disorder prediction 157 175 - -
Ahy14g2881 344 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 1 296 - -
Ahy14g2881 344 MobiDBLite consensus disorder prediction 153 184 - -
Ahy14g2881 344 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 89 140 IPR006456 -
Ahy14g2881 344 SUPERFAMILY Homeodomain-like 218 285 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g2881 Ahy-Chr14 137448684 137450604 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g2881 35 280 ZF-HD Transcription Factor Family AT5G15210 51.984 8.13e-70 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Ahy14g2881 ZF-HD_dimer 2.60E-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g2881 - - qsu:112022185 279.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2881 14 137448684 137450604 Ahy4g2531 4 123137056 123138901 hybridization
Ahy20g2541 20 133725029 133726859 Ahy14g2881 14 137448684 137450604 PCT
Ahy10g2054 10 108410688 108412528 Ahy14g2881 14 137448684 137450604 PCT
Ahy14g2881 14 137448684 137450604 Ahy20g2541 20 133725029 133726859 PCT
Ahy14g2881 14 137448684 137450604 Ahy10g2054 10 108410688 108412528 PCT