Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g2880 ATGTTTAATCTTATACTCTCTCTCTTAAGTATATTTATATACCATAGTTCTAGGGTTAGGGATCTTCACACAGCAGCAAATACGGAATTTGAATCGATAATCATAATCATCATGAGGAGGTACAATCTGAGGAGCAGTGATTCATCAAGGAACGAAGAAAGCAATGATTATTCAAGAGACGTAAGAACGTATGTGAGATACGGAGAGTGTGAGAAGAACCAAGCAGAGCGCATCGGAGGCCACGCCGTCGACGGTTGCAGAGAGTTCATGGCTAGCGGAGCTGAAGGAACACCTCAAGCTCTCACTTGTGCCGCTTGTGGCTGCAACAGAAGCTTCCATAAGCTTGAACTTCGAACCGAGCTTGTTGCCAACCATGGCCGCCATGGTCAAAGCTTACATGGACAGCGCTGA 411 0.4574 MFNLILSLLSIFIYHSSRVRDLHTAANTEFESIIIIIMRRYNLRSSDSSRNEESNDYSRDVRTYVRYGECEKNQAERIGGHAVDGCREFMASGAEGTPQALTCAACGCNRSFHKLELRTELVANHGRHGQSLHGQR* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g2880 136 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 67 116 IPR006456 -
Ahy14g2880 136 Pfam ZF-HD protein dimerisation region 65 116 IPR006456 -
Ahy14g2880 136 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 43 124 - -
Ahy14g2880 136 PANTHER MINI ZINC FINGER PROTEIN 1 43 124 - -
Ahy14g2880 136 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 66 116 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g2880 Ahy-Chr14 137422300 137423300 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy14g2880 61 124 Zinc finger-homeobox gene family AT3G28917 70.769 1.56e-25 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Ahy14g2880 ZF-HD_dimer 3.20E-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g2880 - - ahf:112740680 265.774